| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1886 |
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| Symbol | |
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| ID | 7971065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2018670 |
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| End bp | 2019530 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792488 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943802 |
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| Protein GI | 239814892 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA CTGATACAAC CGGCTCCACG TCTGCTGCGC AAGAAGCCCC GCTCGTAACG
CTCGGCGATG TGCACCTGCG CTTCGGCGCC AACGAGGTGC TCAAGGGCAT CGACCTGGAG
GTGCGGCGCG GCGAGGCCGT GTCCATCATC GGCCCCTCGG GATCGGGCAA GTCGACCATC
CTGCGCTGCA TCACCGGCCT GCTGCGGCCG CAGCGCGGCG CGATCCGCGT GGGCGACACG
CAGGTGGACG CGCTGCGCTC CGAGGCCGAG CTGATCGCGC TGCGCAAGCG CGTGGGCTTC
GTGTTCCAGC AGTACAACCT GTTCCCGCAC CTCACCGTGC TGGAAAACCT GGTGATCGCG
CCCACGCGCG TGGCGGGCCG CGACCGCGCC GCGGCACAGC GCGAAGCGCG TGCGCTGCTC
GACAAGGTGA GGCTGTCGCA CAAGGAGGCC GCCTATCCCG GTGAGCTTTC CGGCGGGCAG
CAGCAGCGCG TTGCCATTGC GCGGGCACTG GCGATGCGGC CCGAGCTGAT GCTGTTCGAC
GAGGTGACCT CGGCCCTCGA CCCCGAGACC GTCGGCGAGG TGCTGACCGT GATCCGCGAC
CTGGTGCAGG AAGGCCTGAC CTGCGTGCTG GTGACGCACG AGATGCGCTT TGCCGAGGAG
ATCAGCGACC AGGTGTATTT CACCGAGGCC GGGGTCATCG TCGAGCACGG TCCTGCGCCG
CGCATCTTCG GCCAACCCGA AAGCGAGCGC ACCCGCGCCT TCCTGCGCCG CGCGCTCGGC
GAAGGCGCGC GCACGGCGCC TGCACGGCCC GCTCCCCTTC CTGAAGCGCT GCCCTTCGAG
CGGCTGCGCT TTGCGCTCTG A
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| Protein sequence | MTATDTTGST SAAQEAPLVT LGDVHLRFGA NEVLKGIDLE VRRGEAVSII GPSGSGKSTI
LRCITGLLRP QRGAIRVGDT QVDALRSEAE LIALRKRVGF VFQQYNLFPH LTVLENLVIA
PTRVAGRDRA AAQREARALL DKVRLSHKEA AYPGELSGGQ QQRVAIARAL AMRPELMLFD
EVTSALDPET VGEVLTVIRD LVQEGLTCVL VTHEMRFAEE ISDQVYFTEA GVIVEHGPAP
RIFGQPESER TRAFLRRALG EGARTAPARP APLPEALPFE RLRFAL
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