| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1879 |
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| Symbol | |
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| ID | 7971058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2011180 |
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| End bp | 2011728 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644792481 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002943795 |
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| Protein GI | 239814885 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGGGCTTC AGATAAAAGC GCTTCGGATG GCCGCCGGGA TCTCCGGCAA CGAGCTGGCC
CACCGTTGCG GCGTCTCCGG TTCGCTGCTT TCCCGCGTCG AGCGTGGTCT CGTGTCTCCT
TCCGTGGAGA CACTCAACCG CATCGCTGTC GGCCTGAACG TTCCGCTGTC GCGATTCTTC
TGCGACCACG CACGCCGTAC GGACTGGTCA TTCGTGCCGG CCGGTCGCGG AATCGTCGTC
GGCCGTATTG GCGCGGTGAA GGACTACCGC TATGAGTTGC TTGGCCATTT GCTGTCGGGC
AACTTGTTCG TTGAGCCCTA TCTGGTGACG CTCCTGCCGC AGGCTGAGCC CTATAGCAGT
TTTCAGCACC CGGGGATCAA GTTCCTGTAC GTGATCTCGG GACGCGCGCA GTACAGGTAC
GGCGGCAAAA TCGTGAACGT CGGGCAGGGC GACTCGCTTC TTTTCGAGGC CAGCGTGCCT
CATGGTGTGG AAGCGATCCT TGAAACGCCG CTCTCATACC TCTCGGTCGT ATTCACATTG
CGTGGCTGA
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| Protein sequence | MGLQIKALRM AAGISGNELA HRCGVSGSLL SRVERGLVSP SVETLNRIAV GLNVPLSRFF
CDHARRTDWS FVPAGRGIVV GRIGAVKDYR YELLGHLLSG NLFVEPYLVT LLPQAEPYSS
FQHPGIKFLY VISGRAQYRY GGKIVNVGQG DSLLFEASVP HGVEAILETP LSYLSVVFTL
RG
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