| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1875 |
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| Symbol | pheT |
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| ID | 7971053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2006902 |
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| End bp | 2009343 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792476 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_002943791 |
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| Protein GI | 239814881 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTCC CGGAATCCTG GCTGCGCGAG TTCTGCAATC CGCCCCTTGG CAGCGCCGAA
CTGGCCGAAA CGCTCACCAT GGGCGGCTTC GAGGTCGAAG AGCGCCGCCC CGTGGCGCCG
CCCTTCAGCC GCATCGTGGT CGGCGAAATC AAGGAAGCCG TGCAGCATCC CAATGCCGAC
CGCCTGCGTG TGTGCCAGGT CGACGCGGGG CAGGGTGCCT TGCTCAACAT CGTGTGCGGC
GCGCCCAATG CGCGCGTCGG CATCAAGGTG CCCTGCGCAC TGGTCGGCGC CGAACTGCCG
CCCGGTGAAG ACGGCAAGCC CTTTCTCATC AAGCTCGGCA AGCTGCGCGG CGTCGAGAGC
CAGGGCATGC TGTGCTCGGC GCGCGAGCTC AAGCTCAGCG AAGACCACGG CGGCCTGCTC
GAGCTCGATG CCGACGCGCC CATTGGTGCC GATGTGCGCG ACATGCTCAA GCTCGACGAC
GCGCTGCTCA CGCTCAAGCT CACGCCCAAC CTTGCGCACG GCCTGAGCGT GTACGGCGTG
GCGCGCGAGC TCGCGGCACT GACCGGTGCG CCACTCAAGA CGCCCGCCAT CGCGCCGGTG
GCCGCATCGT TTGCCGACGT GCTGCCGGTC AAGGTGGAAG CGCCCGAGCT CTGCGGCCGT
TTTTCGGGCC GCATCGTGCG CGGCGTGAAC ACCCAGGTGG CCACGCCCGC ATGGATGGTC
GAGCGCCTGG CGCGCTGCGG CCAGCGCAGC GTGACGCCGC TGGTCGACAT CTCGAACTAC
GTCATGTTCG AGTACGGCCA GCCCAGCCAC ATCTTCGACC TCGACAAGAT CCACGGCGGC
CTCACGGTGC GCTGGGGCAA GGCGGGCGAG CAGCTCAAGC TGCTGAACGG CAACACGATC
AGCGTGGACG ACAAGGTCGG CGTGATCGCC GACGACCAGG CGGTCGAATC GCTCGCCGGC
ATCATGGGCG GCGATGCCAC CTCGGTGTCC GACGACACGC GCAACATCTA CGTCGAGGCC
GCGTTCTGGT GGCCCGAGGC CGTCCAGGGC CGCTCGCGCC GCTTCAACTT CTCGACCGAT
GCGGGGCACC GCTACGAGCG CGGCGTCGAT CCGAGCCGCA CGGTGGAAAT CATCGAGCGC
ATCACGCAGC TCATCATCGA GATCTGCGGC GGCCAGGCCG GCGCCATGGA CGACAAGATC
CTGAACGTGC CCGAGGCCAT GCCCGTCACG CTGCGCGTGG CGCGTGCCGC GCGCGTCATC
GGCATGCCGC TCACGCAGGC GCAATGCGCC GATGCGCTGC GCCGCCTCGG CTTTGCGCTG
CGCGAAGGCG AGGGCACCTT GACCGTCACG CCGCCGCCGC ACCGCTTCGA CCTCTTGATC
GAGGAAGACC TGATCGAAGA GGTTGCGCGC CTGATCGGCT TCAACAACCT GCCGACCAAT
GCGCCGCTCG CGCCCATCAC CGCGCGCGTG CGGCCCGAGT CCCGGCGCAG CCGCTTCGCG
GTGCGCCGCA GCCTGGCCGC GCTCGGCTAC CAGGAAACCA TCAACTTCAG TTTTGTCGAA
GCGCACTGGG AGCAGGACCT GGCCGGCAAT GCCAATCCGG TGAGGCTCCT CAACCCCATT
GCCAGCCAGA TGAGCGTGAT GCGCTCGTCC CTGCTGGGCT CGCTGCTGCA GGTGCTCAAG
TTCAACCTCG ACCGCAAGGC GCCGCGCGTG CGCGTGTTCG AAGTGGGCCG CGTGTTCATG
CGCGACGACA GCGTGGCCAC CACCGACAGC ACCGTGCGCG GCGTCGACCA GCCCATGCGC
GTGGCCGGCC TCGCCTGGGG CGATGCGGAA GAAGCGCGCT GGGACGGCAA GCCGCAGCGC
GTCGACTTCT ACGATGCCAA GGGCGACGTC GAAGCGCTGC TCGCGCCGCG GGTGGCCAGC
TTCGAGCTGG CCGAGCACCC GGCCCTGCAC CCCGGCCGCT CGGCGCGCGT GCTGGTCGAT
GGCAAGGCCA TCGGCTTCAT CGGCGAACTG CATCCGCGCT GGCGCCAGAA GTGGGACTTC
GCACTGGCGC CGGTGCTGTT CGAGCTCGAC CTCGACGCGG TTGCCGCGCG CCCCGTGCCC
CTGGCGCGGC CGGTGCCCAA GCACCAGGCC GTGGAGCGCG ACATTGCGGT GGTGGTGGCC
GAAGCCGTCA CGCACAATGC GTTGATGCAG GCCATCCAAT CGGCGGCAGC GGGGCAGGGG
CTGCTGCGCG ACGCCACGCT GTTCGACATC TACCGTCCGC AACCCGCGCG CGACGGCGCG
GCGCCGGCAT CCGGCGGCCT GGCGCAAGGG GAAAAAAGCA TGGCGGTGCG CCTGAGCTTC
CAGGACGACA GCGCCACGCT GACCGACGAG CAGGTGGAAC CCGCCGTGCG CGCCATCGTC
GAACAACTGA GCGCCAGACT CGGCGCACGC CTGAGAGGTT GA
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| Protein sequence | MQFPESWLRE FCNPPLGSAE LAETLTMGGF EVEERRPVAP PFSRIVVGEI KEAVQHPNAD
RLRVCQVDAG QGALLNIVCG APNARVGIKV PCALVGAELP PGEDGKPFLI KLGKLRGVES
QGMLCSAREL KLSEDHGGLL ELDADAPIGA DVRDMLKLDD ALLTLKLTPN LAHGLSVYGV
ARELAALTGA PLKTPAIAPV AASFADVLPV KVEAPELCGR FSGRIVRGVN TQVATPAWMV
ERLARCGQRS VTPLVDISNY VMFEYGQPSH IFDLDKIHGG LTVRWGKAGE QLKLLNGNTI
SVDDKVGVIA DDQAVESLAG IMGGDATSVS DDTRNIYVEA AFWWPEAVQG RSRRFNFSTD
AGHRYERGVD PSRTVEIIER ITQLIIEICG GQAGAMDDKI LNVPEAMPVT LRVARAARVI
GMPLTQAQCA DALRRLGFAL REGEGTLTVT PPPHRFDLLI EEDLIEEVAR LIGFNNLPTN
APLAPITARV RPESRRSRFA VRRSLAALGY QETINFSFVE AHWEQDLAGN ANPVRLLNPI
ASQMSVMRSS LLGSLLQVLK FNLDRKAPRV RVFEVGRVFM RDDSVATTDS TVRGVDQPMR
VAGLAWGDAE EARWDGKPQR VDFYDAKGDV EALLAPRVAS FELAEHPALH PGRSARVLVD
GKAIGFIGEL HPRWRQKWDF ALAPVLFELD LDAVAARPVP LARPVPKHQA VERDIAVVVA
EAVTHNALMQ AIQSAAAGQG LLRDATLFDI YRPQPARDGA APASGGLAQG EKSMAVRLSF
QDDSATLTDE QVEPAVRAIV EQLSARLGAR LRG
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