| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1869 |
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| Symbol | |
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| ID | 7971047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2000665 |
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| End bp | 2001984 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792470 |
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| Product | isocitrate lyase |
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| Protein accession | YP_002943785 |
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| Protein GI | 239814875 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.612764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGA CCCTCACCGA ACAATTGAGC CGCGAACAGC AAATTGCCGC CCTCGAGAAA
GAATGGGCCA CCAATCCCCG CTGGAAGGGC ATCAAGCGCG GCTACAGCGC CGCCGACGTG
GTTCGCCTTC GCGGCTCCTT CCCCATCGAG CACACGCTTG CGCGCCGCGG CGCCGAGAAG
CTCTGGGAGC TGGTGAACAA CGAGCCCTAC GTCAATTGCC TCGGCGCGCT CACGGGCGGC
CAGGCCATGC AGCAGGTGAA GGCCGGCGTG AAGGCCATCT ACCTGTCGGG CTGGCAGGTT
GCCGCGGACG CCAACACCTA CTCGTCGATG TACCCCGACC AGTCGCTGTA CCCGGTGGAC
TCGGTGCCGA CCGTGGTGGA GCGCATCAAC AACACCTTCC GCCGCGCGGA CGAAATCCAG
TGGTCCAAGA ACGTGAACCC GGGCGACAAG GGCTATGTCG ACTACTTCGC GCCCATCGTC
GCTGACGCCG AAGCCGGCTT TGGCGGCGTG CTGAACGGCT TCGAGCTGAT GAAGGCCATG
ATCAAGGCCG GCGCCGGCGG CGTGCACTTC GAAGACCAGC TCGCCTCGGT CAAGAAGTGC
GGCCACATGG GCGGCAAGGT GCTCGTGCCC ACCACCGAGG CCGTGCAGAA GCTCATCGCC
GCGCGCATGG CCGCCGACGT CTGCGGCACG CCGACGCTCG TGATTGCCCG CACCGACGCC
GAAGCCGCCG ACCTCATCAC CAGCGACTAC GACGAGAACG ACAAGCCCTT CCTCACCGGC
GAACGCACCG CCGAAGGCTT CTACAAGACC AAGAAGGGCA TTGACCAGGC CATCAGCCGC
GCCATTGCCT ACGCCCACTA CGCTGACCTG GTGTGGTGCG AAACCGGCAC GCCCGACCTC
GAGTTTGCCA AGCGGTTTGC CGACGCGGTC CACAAGGTGC ACCCCGGCAA GATGCTGGCC
TACAACTGCT CGCCGTCCTT CAACTGGAAG AAGAACCTCG ACGACGCCAC CATTGCCAAG
TTCCAGAAGG AGCTCGGCGC CATGGGCTAC AAGTACCAGT TCATCACGCT GGCCGGCATC
CACTCGATGT GGTTCAACAT GTTCGATCTG GCGCAAGACT ACGTGCAGCG CGGCATGTCG
GCCTACGTCG AGAAGGTGCA GGAGCCCGAA TTCGCGGCGC GCGATCGCGG TTACACCTTC
GTGTCGCACC AGCAGGAAGT CGGCACCGGC TACTTCGACG AGGTGACCAC GGTCATCCAG
GGCGGCAAGT CCAGCGTCAC GGCGCTGACC GGCTCGACCG AGGAAGAGCA GTTCCACTGA
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| Protein sequence | MPQTLTEQLS REQQIAALEK EWATNPRWKG IKRGYSAADV VRLRGSFPIE HTLARRGAEK
LWELVNNEPY VNCLGALTGG QAMQQVKAGV KAIYLSGWQV AADANTYSSM YPDQSLYPVD
SVPTVVERIN NTFRRADEIQ WSKNVNPGDK GYVDYFAPIV ADAEAGFGGV LNGFELMKAM
IKAGAGGVHF EDQLASVKKC GHMGGKVLVP TTEAVQKLIA ARMAADVCGT PTLVIARTDA
EAADLITSDY DENDKPFLTG ERTAEGFYKT KKGIDQAISR AIAYAHYADL VWCETGTPDL
EFAKRFADAV HKVHPGKMLA YNCSPSFNWK KNLDDATIAK FQKELGAMGY KYQFITLAGI
HSMWFNMFDL AQDYVQRGMS AYVEKVQEPE FAARDRGYTF VSHQQEVGTG YFDEVTTVIQ
GGKSSVTALT GSTEEEQFH
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