| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1860 |
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| Symbol | |
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| ID | 7970877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1992028 |
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| End bp | 1992807 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792461 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943776 |
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| Protein GI | 239814866 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.188134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAG CCAACCTGAT CGAAGCGCGC GGCGTCGCCA AAACCTACCA GAGCAAGGAC
GGCCCGGTCG AGTCGCTGAA GCCGCTCGAC TTTGCCATCC GTGAAGGCGA GTTCGTCTCG
GTCGTCGGCC CTTCGGGCTG CGGCAAGAGC ACGCTGCTCA AGATGGTGGC CGGCCTGCTG
CCGATCAGCG GCGGCGAGCT CACGCTGGCG GGCAAGCCGA TCAAGGGGCC GCAGAAGGAC
GTGGGCATCG TGTTCCAGAG CGCGGTGCTG CTGCCCTGGC GCAGTGTGCA GGACAACATC
CTGCTGCAGG CCGAGATGCG CCACCTGCCC AAGGCCGCCT CCGAGGCCCG GGCGCGCGAG
CTGATGGAGA TGGCGGGCCT CAAGGGCTTC GAGGGCAAGT ACCCCTGGCA GCTTTCGGGC
GGCATGCAGC AGCGCGCGTC GATCTGCCGC GCGCTGCTGC ACGACCCCTC GGTGCTGCTG
ATGGACGAAC CCTTCGGCGC GCTCGACGCG ATGACGCGCG AGAAGATGAA CCTGGAGCTG
CAGCGCATCT GGATGGCCTC CAGGAAAACC GTGATGCTGA TCACGCACAG CATCCCCGAG
GCGATCTTTC TCTCGGACCG CGTGATCGTG ATGAGCGAGC GCCCCGGCTC GATCGCCGCG
GTCTACGACA TCGACCTGCC GCGCCCGCGC ACGCTCGACG TCATGGCCTC GGCCGAGTTC
GGCGCCTACA CCAAAGAGGT GCGCGCGCAC TTTTTCTCGC AGGGCATCCT GGACCACTGA
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| Protein sequence | MSQANLIEAR GVAKTYQSKD GPVESLKPLD FAIREGEFVS VVGPSGCGKS TLLKMVAGLL
PISGGELTLA GKPIKGPQKD VGIVFQSAVL LPWRSVQDNI LLQAEMRHLP KAASEARARE
LMEMAGLKGF EGKYPWQLSG GMQQRASICR ALLHDPSVLL MDEPFGALDA MTREKMNLEL
QRIWMASRKT VMLITHSIPE AIFLSDRVIV MSERPGSIAA VYDIDLPRPR TLDVMASAEF
GAYTKEVRAH FFSQGILDH
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