| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1846 |
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| Symbol | |
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| ID | 7970863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1978829 |
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| End bp | 1980040 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792447 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_002943762 |
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| Protein GI | 239814852 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCACG AGGTCTGCGT CACCGGCCTG GGCGTCGTGG CGCCGCACGG CGACGAGCCC
GGCGCGCTGT TCCAGGCCCT GCTCGACGGC CAGTCGGCCA TCCGGCCGGT CTTCCCCGAA
CTGCCCAAGC CCGCCGCCGC CGCCACGGTG GACTTCGACG AAACACGCTG GTTCACCAAG
CTGCAGCTCG CCGGCGTCGA CCGCGTGAGC CAGCTCGCGG TGGCCGCCGC CGACCTCGCG
CTGCGCGATG CAGGCCTTGC CGCCCACAAC GACGCCGATC CTGAACGCAT CGGCATCTAT
GCCGGCTGCG GCATGGGCGG CGCCGCGGCG CTCGAAGCCG CCTACCGCGG CAACGGGCGG
GTCTCGCCGC TCACCATTCC CGCCTTCATG CCCAACGCGC CCGCCGCCCA CGTCGCCATG
CGCCAGGGCG TGCAGGGGCC GGTGCTGACC TACTCGGTCG CCTGCGCCTC GTCGTCGGTG
GCCATTGCCG AAGCGGCCAA GGCCATCGAG CGCGGTGAAG TCGACATGGC CATTGCCGGC
GGCAGCGAAG CGCTGATCGT GCCGGGCGTG GTGCTGGCCT GGCAGGCCAT GCAAACCCTG
GCCAGCTTCC AGCCCGGCGA AGCGGCCGGC GCGGTGCGGC CCTTTGCGAG CGACCGCAGC
GGCTTTGCGC TGGGCGAAGG CGCGGCCTTC CTGGTGCTCG AATCCGCCGA ACGCGCACGC
AGCCGTGGCG CCCGCAGCTA CGCCACGCTG GCCGGCTGGG GCCTCGGCAG CGACGCCACC
CATCTCACCA AGCCCGACGC ACCCGGCCAG GCGCGCGCGC TGCGCCAGGC GCTGCGCCAG
GCCGGCCTCC AGCCGCGCGA CGTGGGCTAC TGCAATGCGC ACGGCACGGC CACGCGCATC
GGCGACGTGG TCGAGCGCAA CGCATTGGCC GATGTGTGGG GCGACGACCT GGACAGCCTG
CGCGTCAGCT CCACCAAGGC GCTGCACGGC CACATGCTCG GCGCCGCGGG TGCCATCGAG
GCGCTCATCA CGGTGCTGGC ATTGCACCGC CGCCAGCTGC CGCCGAACGC GAACTGCAGC
GAGGTCGATC CGGCCTGCAG CCTGAACCTC GTCACGCAGC ACGACACCAG CGCGCCCAAC
ATCGAGGCGG CCATGAGCAA CTCCTTCGCA TTCGGCGGCA CGAATTCCGT GCTGCTCTTC
CGCCGCGCGT GA
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| Protein sequence | MKHEVCVTGL GVVAPHGDEP GALFQALLDG QSAIRPVFPE LPKPAAAATV DFDETRWFTK
LQLAGVDRVS QLAVAAADLA LRDAGLAAHN DADPERIGIY AGCGMGGAAA LEAAYRGNGR
VSPLTIPAFM PNAPAAHVAM RQGVQGPVLT YSVACASSSV AIAEAAKAIE RGEVDMAIAG
GSEALIVPGV VLAWQAMQTL ASFQPGEAAG AVRPFASDRS GFALGEGAAF LVLESAERAR
SRGARSYATL AGWGLGSDAT HLTKPDAPGQ ARALRQALRQ AGLQPRDVGY CNAHGTATRI
GDVVERNALA DVWGDDLDSL RVSSTKALHG HMLGAAGAIE ALITVLALHR RQLPPNANCS
EVDPACSLNL VTQHDTSAPN IEAAMSNSFA FGGTNSVLLF RRA
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