| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1836 |
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| Symbol | |
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| ID | 7970853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1968391 |
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| End bp | 1969386 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792437 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_002943752 |
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| Protein GI | 239814842 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.792867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG GAACCTGCCA AGGCCTTGGC CCCGATTGGG TTGCGCGCGC ATCGAACGAC
GGTTCCTTTC CATCGGTCGA TTCCCTTGAG GAAACCCGCG TGCCGCCATC GTCCATCCCC
TCCTCCAGCC CTGATTTCTC GGGCCTCTGG ATTCCCCTTG TCACGCCGTT CCAGCACGGC
GCCGTCGACC ACGCCGCGCT GTCGGCGCTG ACACGCCGGC TCGCCGGCGA CGGCGTGACC
GGCTTCGTGG TCTGCGCCTC GACCGGCGAA GCCGCCGCGC TCGATGAAGC GGAGCAGCTC
GCCGCGCTCG ACACGGTCCA GGCTGCCGCC GGCGGGCTGC CGATCATCAT GGGCCTGTCG
GGCTACCACC TGGGCAAGAC CACGGCCTGG GTACGGCGGC TCGCCGAACG GCCGCTGGCG
GGGCTGCAGG TGTCCGCGCC GCACTACATC CGGCCCTCGC AGGCCGGCCT GCTCGAATGG
TTCCGCGCCA TCGCCGACGC CAGCGCGGTG CCGCTGCTGG TCTACGACAT TCCCTACCGC
ACCGGCGCAA CCCTCACGCG CGAAACGCTG CTGGCGCTGG CCGAACACCC GCGCATCCGC
GGCATCAAGG ACTGCGGCGG CGACATGGCC AAGACGCGCG CCGTGATTGC CGATGGCAGG
CTCCAGGTGC TGTCGGGCGA AGACCACCAG ATCTTCGGCA CCGTGGCCGA AGGCGGCGTG
GGCGCCATTG CGGCGAGCGC GCATGTGCAG ACGCGGCGCT TCGTGCAGGT GCTGCGCCTC
TTGGCCGAGA ACCGGCTGGC AGAAGCGCGC GCCGAATGGC AGCCGCTGCA GCCGCTGATC
GAAATGCTGT TTGCGGAGCC GAACCCCGCG CCGCTCAAGG CGCTGCTGGC GCACGGCGGA
TCGATGCGCG ACGAGCTGCG CTCGCCGATG ACCCGCGCCT CCAATGCCTT GCGCGAGCGC
CTGGTGGTGC TGGACGCCCG GCTCAGCCGC CCGTAA
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| Protein sequence | MSDGTCQGLG PDWVARASND GSFPSVDSLE ETRVPPSSIP SSSPDFSGLW IPLVTPFQHG
AVDHAALSAL TRRLAGDGVT GFVVCASTGE AAALDEAEQL AALDTVQAAA GGLPIIMGLS
GYHLGKTTAW VRRLAERPLA GLQVSAPHYI RPSQAGLLEW FRAIADASAV PLLVYDIPYR
TGATLTRETL LALAEHPRIR GIKDCGGDMA KTRAVIADGR LQVLSGEDHQ IFGTVAEGGV
GAIAASAHVQ TRRFVQVLRL LAENRLAEAR AEWQPLQPLI EMLFAEPNPA PLKALLAHGG
SMRDELRSPM TRASNALRER LVVLDARLSR P
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