| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1831 |
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| Symbol | |
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| ID | 7970848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1963482 |
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| End bp | 1964804 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792432 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_002943747 |
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| Protein GI | 239814837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.902916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCA TCCAAGTAGG CCTGCTCGGC GCAGGCACGG TCGGCAGCGG CACCTTCAAG
GTGCTGCTGC GCAATCAGGA AGAAATCAAG CGCCGCGCCG GCCGGGGCAT CGAGATCACG
ATGGTGGCCG ACCTGGACGC GGCGCGTGCG CGCGAAGTGG CTGGCGAAGG CGTGAAGGTG
GTAGCCGATG CGCGCGAAGT CATCGCCAAC CCGGACATCG ACATCGTCAT CGAGCTCATC
GGTGGCTACG GCATTGCGAG GCAACTGGTG CTCGAGGCGA TTGCGGCAGG CAAGCACGTG
GTCACAGCCA ACAAGGCGCT GCTTGCGGTG CATGGCACCG AGATCTTCGC GGCCGCGCAT
GCCAAGGGCG TGATGGTGGC CTTCGAAGCG GCCGTGGCCG GTGGCATCCC GATCATCAAG
GCGCTGCGCG AGGGCCTCAC GGCCAACAGC ATCCAGTGGC TGGCCGGCAT CATCAACGGC
ACCACCAACT TCATCCTCTC CGAGATGCGC GACAAGGGGC TCGACTTCGC CACCGTGCTC
AAGGAGGCGC AGCGCCTGGG CTACGCCGAA GCCGACCCCA CCTTCGACAT CGAAGGCGTG
GACGCCGGCC ACAAGGTCAC GCTGATGAGC GCCATTGCCT TCGGCATTCC GGTGCAGTTC
GACAAGGCGC ACATCGAGGG CATCACCAAG CTCGCGGCGC AGGACATCAA GTACGCCGAA
CAGCTCGGCT ACCGCATCAA GCTGCTCGGC ATCACCAAGC GCACCGCGCA GGGCATCGAA
CTGCGCGTGC ACCCCTCGCT CGTGCCGTCG AAGCGGCTGC TTGCGAACGT CGAAGGCGCG
ATGAACGCGG TGGTGGTGCA TGGCGACGCC GTCGGCACCA CGCTGTACTA CGGCAAGGGC
GCGGGCAGCG AGCCGACCGC CAGCGCGGTG ATCGCCGACC TCGTCGACAT CACGCGCCTG
CACACGGCCG ATGCCGCACA CCGCGTGCCG CACCTGGCCT TCCACCCTGA TGCCATGAGC
GACCTGAAGG TGCTGCCGAT GGCCGAGGTG GTTACCAGCT ACTACCTGCG CCTGCGCGTG
GCCGACCAGG CCGGCGTGCT TGCCAAGGTC ACGGGCCTCC TGGCCACCGC GGGCATCAGC
ATCGACGCGG TGCTGCAGCG CGAAGCCGAC GAAGTGGGCG GCGAGGGCTC GACCCAGACC
GACCTGATCA TCCTCACGCA CGATGCGCGC GAAGGCACGG TGAACGACGT GCTCGCCGAA
CTGCAGGCCC TGCCCACCGT GCTGCAGCCG ATCGTGCGCA TCCGCAAGGA AGAGCTGTCC
TGA
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| Protein sequence | MKPIQVGLLG AGTVGSGTFK VLLRNQEEIK RRAGRGIEIT MVADLDAARA REVAGEGVKV
VADAREVIAN PDIDIVIELI GGYGIARQLV LEAIAAGKHV VTANKALLAV HGTEIFAAAH
AKGVMVAFEA AVAGGIPIIK ALREGLTANS IQWLAGIING TTNFILSEMR DKGLDFATVL
KEAQRLGYAE ADPTFDIEGV DAGHKVTLMS AIAFGIPVQF DKAHIEGITK LAAQDIKYAE
QLGYRIKLLG ITKRTAQGIE LRVHPSLVPS KRLLANVEGA MNAVVVHGDA VGTTLYYGKG
AGSEPTASAV IADLVDITRL HTADAAHRVP HLAFHPDAMS DLKVLPMAEV VTSYYLRLRV
ADQAGVLAKV TGLLATAGIS IDAVLQREAD EVGGEGSTQT DLIILTHDAR EGTVNDVLAE
LQALPTVLQP IVRIRKEELS
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