| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1827 |
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| Symbol | |
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| ID | 7970844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1959071 |
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| End bp | 1960858 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792428 |
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| Product | PhoH family protein |
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| Protein accession | YP_002943743 |
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| Protein GI | 239814833 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.298411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTGC CTCCCGCCCC CACGAAACGC GCCGCATTGC TCTCGCCGGA TGCGCACGAT
GCACCCGCCC GTTCCTCGCA CAGGGGATCG CGCCGCTCGG GCGAATCGCG TACCGATTCG
GCGTCGTCGA GCGGCTCTTC CCAGCCGCTG GAATTGTTCG ACCGACACGC CGCCGACGCG
GTAGGCGGCG GCAGCGAGGC TGCACCGCCG ATCCGCGCGA AAGCCAAACC CGCGCCTTCC
CGCGGCCAGC GGCAGCAGCC CACCGCGCGA CGGGAGCCTG AGGCGCCGGC GCCCGCCGTG
CATGCACCCG CGCCACAGCA GCAGCAGATC GCGGCAACGC AGGCCCCGGC GCGGCCCAAG
CGCAGCAAAT CCAACGGTCC GGCCAAGCTG TTCGTGCTCG ACACCAACGT GCTGCTGCAC
GACCCGATGT GCCTGTTCCG CTTCGAGGAG CACGACATCT TCCTGCCGAT GATCGTGCTC
GAGGAACTGG ACGGCCACAA GAAGGGCACC ACGGAAGTGG CCCGCAACGG CCGCCAGACC
AGCCGCACGC TCGATGCGCT GGCGGCCGCC CAGGACGCCG ACATCGCCAA GGGCCTGAAG
CTCGACACCA CCGGCCATCG CGAGGCCGGC GGCAAGCTGT TCTTCCAGAC CGCGCCGCTC
GACTACTCGC TGCCGATCAG CCTGCCCCAG GGCAAGGCCG ACAACCAGAT CCTCGGCGTG
GTGCAGGCCT TGCGCGACCT CTACGCCAAC GACCAGCCCG GCCGGCCGAA GCAGGAAGTG
GTGCTGGTGT CCAAAGACAT CAACATGCGC GTCAAGGCGC GCGCCCTGGG CCTGGCTGCC
GACGACTACC AGAACGACAA GACGCTGGAA GACGGCGACC TGCTCTACGC GGGCTCGCTC
GCGCTGCCGC CCGACTTCTG GACGCGCCAG AGCAAGACGG TCGAAAGCTG GCAAAGCGGC
AGCAACACCT TCTACCGGGT CAGCGGGCCG CTGGTGCCCA ACTTGTACAT CAACCAGTTC
GTCTACTTCG AGGCCCCGGG CGAGCCGAGC ATGTACGCGC GCGTCACCGA GATCCGCGAC
AAGACCGCGG TGTTCAAGAC CCTCAAGGAC TACAGCTCGG GCAAGAACGC GGTCTGGGGC
GTGAACACCC GCAACCGCGA GCAGAACTTC GCGATGAACC TGCTCATGGA CCCGGAAGTC
GACTTCGTCA CGCTCACCGG CACCGCCGGC ACCGGCAAGA CGCTGATGGC ACTCGCCTCG
GGCCTCACGC AGGTGCTCGA CGACCGGCGC TACACCGAGA TCATCATGAC CCGCGCGACG
GTGAGCGTGG GCGAGGACAT CGGCTTCCTG CCCGGCACCG AGGAAGAAAA AATGGGCCCG
TGGATGGGCG CGCTCGACGA CAACCTCGAG TTCCTTGCCA AGGGCGACGG CGGCGGCGCC
GGCGAATGGG GCCGCGCGGC CACCAACGAG CTGATCCGAA GCCGCATCAA GGTCAAGAGC
ATGAACTTCA TGCGCGGGCG CACCTTCCTG AACAAGTACG TGATCATCGA CGAGGCGCAG
AACCTGACGC CCAAGCAGAT GAAGACGCTG ATCACCCGCG CCGGTCCGGG CACCAAGATC
ATCTGCATGG GCAACCTTGC GCAGATCGAT ACGCCCTACC TGACGGAAGG CTCCTCGGGC
CTCACCTTCG CGGTCGACAA GTTCAAGGGC TGGCCGCACG GCGGGCACAT CACGCTGGCG
CGCGGCGAGC GCTCCCGGCT GGCCGACTTC GCGAGCGACG TGCTTTAA
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| Protein sequence | MPLPPAPTKR AALLSPDAHD APARSSHRGS RRSGESRTDS ASSSGSSQPL ELFDRHAADA
VGGGSEAAPP IRAKAKPAPS RGQRQQPTAR REPEAPAPAV HAPAPQQQQI AATQAPARPK
RSKSNGPAKL FVLDTNVLLH DPMCLFRFEE HDIFLPMIVL EELDGHKKGT TEVARNGRQT
SRTLDALAAA QDADIAKGLK LDTTGHREAG GKLFFQTAPL DYSLPISLPQ GKADNQILGV
VQALRDLYAN DQPGRPKQEV VLVSKDINMR VKARALGLAA DDYQNDKTLE DGDLLYAGSL
ALPPDFWTRQ SKTVESWQSG SNTFYRVSGP LVPNLYINQF VYFEAPGEPS MYARVTEIRD
KTAVFKTLKD YSSGKNAVWG VNTRNREQNF AMNLLMDPEV DFVTLTGTAG TGKTLMALAS
GLTQVLDDRR YTEIIMTRAT VSVGEDIGFL PGTEEEKMGP WMGALDDNLE FLAKGDGGGA
GEWGRAATNE LIRSRIKVKS MNFMRGRTFL NKYVIIDEAQ NLTPKQMKTL ITRAGPGTKI
ICMGNLAQID TPYLTEGSSG LTFAVDKFKG WPHGGHITLA RGERSRLADF ASDVL
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