| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1822 |
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| Symbol | |
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| ID | 7970839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1955399 |
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| End bp | 1956808 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792423 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_002943738 |
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| Protein GI | 239814828 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0791999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG TTTTTTCCTA TGCCGACAAT GACCCGTCGG CCGATCGTCA AGTTGCCCAG
CTTCGCATTC CGCCTCATTC GATCGAGGCC GAGTCGAGCG TGCTCGGCGG CCTGCTGCTC
GACAACGGTG CCTGGGACCG CATGGGCGAC CTGCTGGTGG ATGGCGACTT CTACCGCCAC
GAGCACAAGC TGATCTACGC CGCGATCGGC GGATTGATCA ACGCCAGCAA GCCGGCCGAC
GTCATCACGG TCTACGAGCA GCTGCAGGGC CTGGGCAAGG CCGATGAAAT CGGCGGTCTG
GTCTACCTCA ATTCGCTCGC GCAGTATGTG CCGAGCGCGA GCAACATCCG CCGCTACGCG
GAGATCGTGC GCGAACGCTC GATCCTGCGG AAACTCGTCT CCGCAAGCGA CGAGATCGCG
ACCAACGCGT TCAACCCGCA GGGCAAGTCG GTCGACAAGA TCCTGGACGA GGCCGAACAG
AAGATCTTCA ACATCGGCGA AGAAGGCACG CGGATGAAGC AGGGCTTCCA GAGCATGGAT
GCCCTGGTGG TCGAACTGCT CGACCGCGTG ACCGAGATGG CGGAGAACCC GAACGACATC
ACGGGCGTGC GCACCGGCTT CTACGAGTTC GACAAGATGA CCTCGGGCCT GCAGCCGGGC
GACATGATCG TGCTGGCCGC GCGCCCTTCC ATGGGCAAGA CCTCGCTGGC CATCAACATC
GCCGAGCACG TGGCGCTCAA CGAAGGGCTG CCGGTGGCGG TCTTCTCGAT GGAAATGGGT
GCGTCGCAGC TGGCGGTGCG CATCGTGGGT TCGATCGGGC GCATCGACCA GGGACACCTG
CGCACCGGCA AGCTCAGCGA CGAAGAATGG CCGCGCCTCA CGGAAGCGAT CGAGAAGCTG
CGCAACGTGT CGCTGCACAT CGACGAGACC CCTGGCCTGA CCACCAGCGA GCTGCGTGCC
AATGCGCGCC GCCTGGCGCG CCAGTACGGG CGCCTCGGCC TGATCGTGGT CGACTACCTC
CAGCTCATGA GCGTGTCGAC CAGCATGAAC GACGAGAACC GCGCCACGGC CGTGGGCGAA
ATCTCGCGTG GCCTGAAGAT GCTCGCCAAG GAGCTCAAGT GCCCGGTGAT CGCGCTGTCG
CAGTTGAGCC GCGGCGTCGA AAGCCGCACC GACAAGCGTC CCATGATGAG CGACCTGCGC
GAATCCGGCG CCATCGAGCA GGACGCGGAC ATCATCATGT TCATCTACCG CGACGACTAC
TACGACAAGA ACAGCAAGGA GCCGGGCGTG GCCGAGGTGA TCATCAGCAA GCACCGCAAC
GGGCCCACGG GCACCGTCAA GCTGACTTTC CTCAAGCCGC TCACCAAGTT CGAGAACCTG
GCCAGCTACG GCAGCAGCGA CGACTACTGA
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| Protein sequence | MSAVFSYADN DPSADRQVAQ LRIPPHSIEA ESSVLGGLLL DNGAWDRMGD LLVDGDFYRH
EHKLIYAAIG GLINASKPAD VITVYEQLQG LGKADEIGGL VYLNSLAQYV PSASNIRRYA
EIVRERSILR KLVSASDEIA TNAFNPQGKS VDKILDEAEQ KIFNIGEEGT RMKQGFQSMD
ALVVELLDRV TEMAENPNDI TGVRTGFYEF DKMTSGLQPG DMIVLAARPS MGKTSLAINI
AEHVALNEGL PVAVFSMEMG ASQLAVRIVG SIGRIDQGHL RTGKLSDEEW PRLTEAIEKL
RNVSLHIDET PGLTTSELRA NARRLARQYG RLGLIVVDYL QLMSVSTSMN DENRATAVGE
ISRGLKMLAK ELKCPVIALS QLSRGVESRT DKRPMMSDLR ESGAIEQDAD IIMFIYRDDY
YDKNSKEPGV AEVIISKHRN GPTGTVKLTF LKPLTKFENL ASYGSSDDY
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