| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1816 |
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| Symbol | |
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| ID | 7970833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1950537 |
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| End bp | 1952930 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792417 |
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| Product | phosphoenolpyruvate synthase |
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| Protein accession | YP_002943732 |
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| Protein GI | 239814822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAC TTTTCGACGC GACCGCCCTG GTCGTACCGT TTGAAAACCT GAGGATGACC
GACGTCGAGT CGGTCGGCGG CAAGAACGCC AGCCTCGGCG AAATGATCTC GCAATTGCCG
CAGGGCGTGC GGGTGCCCAC GGGCTTCGCG ACCACGGCGC ATGCGTTCCG CCAGTTCCTT
GCCCACGACG GCTTGGCCGA CAAGATCAGC AAGCGGCTCG CCGCCCTGGA CACCGAAGAC
GTGCGGGCGC TGGCCGTGGC CGGCGCCGAG ATCCGTGCGA TGGTCGAGGC CCAGCCCTTT
CCGGCCGACC TGCAGAAAGC CATCACCGAG GCGTTCGCGA AGCTGAGCGA AGGCAACCCC
GCCGCCTCGT TCGCCGTGCG CTCCTCGGCC ACGGCCGAAG ACCTGCCCGA CGCCTCCTTC
GCGGGCCAGC AGGAAACCTT CCTGAACGTG GTCGGCATCG ACGACGTGCT GCACAAGATG
AAGGAAGTCT TTGCTTCCCT CTACAACGAC CGCGCCATCA GCTACCGCGT GCACAAGGGC
TTCGCGCACG ACGTGGTGGC GCTCTCGGCG GGCGTGCAGC GCATGGTCCG CTCGGACCTT
GGCGCGGCCG GCGTGATGTT CACCATCGAC ACCGAGTCGG GCTTCGAGGA CGTGGTGTTC
ATCACCTCCA GCTACGGCCT CGGTGAAACG GTGGTGCAGG GCGCCGTGAA CCCCGACGAG
TTCTACGTTC ACAAGCCCAC GCTGCGCGCC GGCAAGAAGG CCGTGATCCG CCGCAACCTG
GGCTCCAAGC TGATCCAGAT GGAGTTCGCC ACGCCCGAGG AGAAAAAGGC CACCGGCAAG
CTGGTGAAGA CCACCGACGT CAAGACCGAG CAGCGCAACC GCTATTCGCT GAGCGACGCC
GACGTCGAGC AGCTCGCCAG GTATGCGCTC GTGATCGAAG AACACTATGG CCGCCCGATG
GACATCGAGT GGGGCAAGGA CGGCACCGAC GGCCAGCTCT ACATCCTGCA GGCGCGCCCT
GAAACCGTGA AGAGCCAGCA GCAGGGCAAG GCCGAGCAGC GCTACAAGCT GCTGGGCAAG
GGGGCGGTGC TCGCCGAAGG CCGTGCCATC GGCCAGAAGA TCGGTACCGG CCCCGTGCGG
CTCGTGCACA ACATCAGCGA AATGGACAAG GTCCAGGCCG GCGACGTGCT CGTCACCGAC
ATGACCGACC CCAACTGGGA GCCGGTGATG AAGCGCGCCG CCGCCATCGT CACCAACCGC
GGCGGGCGCA CCTGCCACGC GGCCATCATT GCGCGCGAGC TCGGCATTCC AGCCGTGGTC
GGCTGCGGCG ACGCCACCGA CCTGCTGAAG GACGGCACGC TCGTGACCGT GAGCTGCGCC
GAGGGCGACA CCGGCTTCAT CTACGACGGC CTGCTCGAAA CCGAGGTGAC CGAAGTGCAG
CGCGGCGTGA TGCCCGAGAT CGACATCCAG CTGATGATGA ACGTCGGCAA CCCGCAGCTG
GCCTTCGACT TCGCGCAGCT GCCGAACCAC GGCGTGGGCC TGGCCCGCCT CGAGTTCATC
ATCAACAACA ACATCGGCGT GCATCCGAAG GCGATCCTCG ACTATCCGAA CGTCGACAAC
GACCTGAAGA AGGCCGTTGA ATCCGTGGCC CGCGGCCATG CCTCGCCGCG CGCCTTCTAT
GTCGACAAGG TGGCCGAAGG CATCGCGACC ATCGCTGCGG CCTTTTGGCC CAAGAAGGTG
ATCGTCCGCC TGTCGGACTT CAAGTCGAAC GAATACCGCA AGCTGATCGG CGGCAGCCGC
TACGAGCCGG AAGAAGAAAA CCCGATGCTC GGCTTCCGCG GCGCCGCGCG CTACCTGAGC
AAGGATTTCG GCGAGGCCTT TGCCATGGAA TGCGAGGCAC TCAAGCGCGT GCGCAACGAC
ATGGGCCTCG TCAACGTGCA GATCATGGTG CCCTTCGTGC GCACGCTGGG CCAGGCCGAA
CGCGTCACCA CGCTGCTTGG CGAACATGGC CTCAAGCGCG GCGAGAACGA GCTCAAGCTG
ATCATGATGT GCGAGGTGCC GAGCAACGCC ATCCTGCCGG AAGAGTTCCT GAAGTACTTC
GACGGCTTCT CGATCGGCTC GAACGACCTG ACCCAGCTCA CGCTCGGCCT GGACCGCGAT
TCGGGGCTCG AACTGCTGGC CGCCGACTTC GACGAGCGCG ACCCGGCCAT CAAGGCGCTG
CTGAGCCGCG TCATCAAGGC CTGCAAGGCC GAGGGCAAGT ACGTCGGCAT CTGCGGCCAG
GGCCCCAGCG ACCACCCGGA CTTCGCGCTC TGGCTGGCGG AGCAGGGCAT CGAGTCGATT
TCGCTCAATC CGGACAGCGT CATCGACACC TGGCAGCAGC TCGCCAAGCG CTGA
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| Protein sequence | MSALFDATAL VVPFENLRMT DVESVGGKNA SLGEMISQLP QGVRVPTGFA TTAHAFRQFL
AHDGLADKIS KRLAALDTED VRALAVAGAE IRAMVEAQPF PADLQKAITE AFAKLSEGNP
AASFAVRSSA TAEDLPDASF AGQQETFLNV VGIDDVLHKM KEVFASLYND RAISYRVHKG
FAHDVVALSA GVQRMVRSDL GAAGVMFTID TESGFEDVVF ITSSYGLGET VVQGAVNPDE
FYVHKPTLRA GKKAVIRRNL GSKLIQMEFA TPEEKKATGK LVKTTDVKTE QRNRYSLSDA
DVEQLARYAL VIEEHYGRPM DIEWGKDGTD GQLYILQARP ETVKSQQQGK AEQRYKLLGK
GAVLAEGRAI GQKIGTGPVR LVHNISEMDK VQAGDVLVTD MTDPNWEPVM KRAAAIVTNR
GGRTCHAAII ARELGIPAVV GCGDATDLLK DGTLVTVSCA EGDTGFIYDG LLETEVTEVQ
RGVMPEIDIQ LMMNVGNPQL AFDFAQLPNH GVGLARLEFI INNNIGVHPK AILDYPNVDN
DLKKAVESVA RGHASPRAFY VDKVAEGIAT IAAAFWPKKV IVRLSDFKSN EYRKLIGGSR
YEPEEENPML GFRGAARYLS KDFGEAFAME CEALKRVRND MGLVNVQIMV PFVRTLGQAE
RVTTLLGEHG LKRGENELKL IMMCEVPSNA ILPEEFLKYF DGFSIGSNDL TQLTLGLDRD
SGLELLAADF DERDPAIKAL LSRVIKACKA EGKYVGICGQ GPSDHPDFAL WLAEQGIESI
SLNPDSVIDT WQQLAKR
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