| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1813 |
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| Symbol | |
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| ID | 7970830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1947307 |
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| End bp | 1947870 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644792414 |
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| Product | peroxiredoxin |
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| Protein accession | YP_002943729 |
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| Protein GI | 239814819 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.867637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCTGA TCAACACCCA AGTCCAACCC TTCAAGACCC AGGCCTACCT CAACGGCAAG
TTCATCGATG TGTCCGACGA GACGCTCAAG GGCAAATGGT CCGTGCTGAT CTTCATGCCC
GCAGCCTTCA CCTTCAACTG CCCGACCGAA GTCGAAGACG CGGCCGACAA CTACCCCGAG
TTCCAGAAGC TGGGTGCCGA GGTCTACATC GTGACCACCG ACACGCACTT CTCGCACAAG
GTCTGGCACG ACACGTCGCC GGCCGTCGGC AAGGCCAAGT TCCCCCTGGT GGGCGACCCC
ACCCACACGC TGACCAACGC TTTCGGTGTG CACATCCCTG AAGAAGGCCT GGCACTGCGC
GGCACCTTCG TGATCAATCC GGAAGGCATC ATCAAGACCG CCGAAGTTCA CTCCAACGAG
ATCGCCCGCG ACGTCAAGGA AACCCTGCGC AAGCTGAAGG CAGCGGTCTA CACCGCCGCC
CACCCGAACG AAGTCTGCCC GGCCAAGTGG AACGAAGGCG ACAAGACCAT CGCGCCGTCG
TTCGACCTCG TCGGCAAGAT CTAA
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| Protein sequence | MSLINTQVQP FKTQAYLNGK FIDVSDETLK GKWSVLIFMP AAFTFNCPTE VEDAADNYPE
FQKLGAEVYI VTTDTHFSHK VWHDTSPAVG KAKFPLVGDP THTLTNAFGV HIPEEGLALR
GTFVINPEGI IKTAEVHSNE IARDVKETLR KLKAAVYTAA HPNEVCPAKW NEGDKTIAPS
FDLVGKI
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