Gene Vapar_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1810 
Symbol 
ID7970827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1945675 
End bp1945974 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content64% 
IMG OID644792411 
Producthypothetical protein 
Protein accessionYP_002943726 
Protein GI239814816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGT CGCTTCTTTT CACCGTCGCC GCCGCCGCCG CGGTCCTCTG GGCTGCGCCG 
GCCTCCGCCC AGTTCGTCGA TCACGACGCG GTCAAGTGTG CGCCGGTTCC CAAGGCGGAG
ATGCGCCCGC AGATGGAGCT GCAACGCAAG CTGACCAGCG AAGGCTGGAA GGTTCGCCAG
GTCAAGGACT TCAATGGCTG CTACGAGGTC TACGGCTTCG ACGAGAAGGG CCAGCGCACC
GAGGCCTTCT TCGATCCCAA GACCTTCGAG AAGGTCGGGC AGGTGAAGCA GCCGTCCTGA
 
Protein sequence
MNKSLLFTVA AAAAVLWAAP ASAQFVDHDA VKCAPVPKAE MRPQMELQRK LTSEGWKVRQ 
VKDFNGCYEV YGFDEKGQRT EAFFDPKTFE KVGQVKQPS