| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1804 |
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| Symbol | |
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| ID | 7970821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1939811 |
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| End bp | 1940023 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644792405 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943720 |
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| Protein GI | 239814810 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4256] Hemin uptake protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.822269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCCA AACCGAACGC CTTTTCTGTT CTGAGCCATC CTTCGCTCGA CCAATCGGGT
GGCGGACATG CGTCCATCCA GGCAGCGCGC CCGGCGCCGA TGGTCGAAAG CACGGAGCTT
CTGAAAGGAA GCAAGACCGT GGGCATCATG CACAACGGTT CCCTCTACAG GCTACAGGCC
ACCAAACTCG GCAAGCTGAT TCTTACCAAG TAA
|
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| Protein sequence | MQAKPNAFSV LSHPSLDQSG GGHASIQAAR PAPMVESTEL LKGSKTVGIM HNGSLYRLQA
TKLGKLILTK
|
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