| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1796 |
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| Symbol | |
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| ID | 7970813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1932242 |
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| End bp | 1933228 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792397 |
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| Product | Alcohol dehydrogenase zinc-binding domain protein |
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| Protein accession | YP_002943712 |
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| Protein GI | 239814802 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.65094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCAT GGCTTTGCGA AAACCCCACC GGCGTCGATG CGCTGGCCTG GAAGGAACTG
CCGACGCCGG CGCCGGGTCC GGGCCAGGTG CTGATCGAGA TCAGGGCAGC CAGCCTCAAC
TTCCCCGATC TGCTGATCGT GCAGAACAAA TACCAGATCA AGCCGCCGCT GCCCTTCGTG
CCCGGTTCGG AATACGCCGG CGTCGTCCAG GCGGTGGGCG AAGGCGTCAC CCACCTGAAG
GTCGGCCAGA ACGTGGCCTG CCTTTCGGGC ACGGGCGGGT TCGCAACCCA CACGCTGGCA
CCGGCGGCGC TGTGCATGCC GCTGCCCGAA GGCTTCGGCC ATGTCGACGC GGCGGCGTTC
ATCATGATCT ATGCCACCTC GTGGCATGCG CTGATGGACC GCGCGCAGCT CAAGGCCGGT
GAAACCGTGC TCGTGCTCGG CGCGGCAGGC GGCGTGGGCA CCGCCGCCAT TCAAATCGCA
AAGGCGGCAG GCGCCAAAGT GATTGCGGCG GCTTCTACCG ACGAGAAATG CGAACTCTGC
CGCTCCATTG GCGCCGACGC CACCATCAAC TACACCACGC ATGCGCTTCC AGGCGGCTTT
CGCGATGCCA TCAAGGCCGC GACCGACGGC AAAGGCCCCG ACGTCATTTA CGACCCGGTG
GGCGGTGATT TCGCCGAGCC TGCATTTCGC TCGATTGCAT GGCGCGGACG CTATTTGGTG
GTCGGCTTTG CCTCCGGGCC GATTCCGTCG CTGCCATTGA ACCTCACGCT GTTGAAAGGC
GCTTCCCTGG TCGGTGTGTT CTGGGGCGAT TTCGCCAAGC GCGAGCCCAA GGCCAATGCA
CAAATGATGG CCGAATTGGC GCACTGGTAC GGACAGGGAA AGATCAAGCC CGTGATCGAC
AGCACGATGC AGATGTCACA ATTGAAAGCT GCCTATGCCC ACATGGGATC GCGCGGCGTC
AAAGGAAAAC TCGTGATGGT GAACTGA
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| Protein sequence | MHAWLCENPT GVDALAWKEL PTPAPGPGQV LIEIRAASLN FPDLLIVQNK YQIKPPLPFV
PGSEYAGVVQ AVGEGVTHLK VGQNVACLSG TGGFATHTLA PAALCMPLPE GFGHVDAAAF
IMIYATSWHA LMDRAQLKAG ETVLVLGAAG GVGTAAIQIA KAAGAKVIAA ASTDEKCELC
RSIGADATIN YTTHALPGGF RDAIKAATDG KGPDVIYDPV GGDFAEPAFR SIAWRGRYLV
VGFASGPIPS LPLNLTLLKG ASLVGVFWGD FAKREPKANA QMMAELAHWY GQGKIKPVID
STMQMSQLKA AYAHMGSRGV KGKLVMVN
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