| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1793 |
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| Symbol | |
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| ID | 7970809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1930299 |
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| End bp | 1930547 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792393 |
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| Product | Transglycosylase-associated protein |
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| Protein accession | YP_002943709 |
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| Protein GI | 239814799 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2261] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.899255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATCG TCTGGACCAT CCTGATCGGG TTCATCGTGG GTCTCGTGGC GCGGGCCGTC
AAGCCGGGCG ACGATTCCGC AGGCTTCATC GTGACCACGC TGATCGGCGT GGCGGGTTCC
CTGATCGTGA CCTATGTCGG CCAGGCACTC GGCTGGTACA CCGCGGGCCA GGGGGCGGGC
TTCATTGCCT CGGTGCTCGG CGCGATCGTG CTGCTGATCC TGTACGGCCT GATCAAGCGC
AAGAGCTGA
|
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| Protein sequence | MSIVWTILIG FIVGLVARAV KPGDDSAGFI VTTLIGVAGS LIVTYVGQAL GWYTAGQGAG
FIASVLGAIV LLILYGLIKR KS
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