Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1789 |
Symbol | |
ID | 7970804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1926772 |
End bp | 1927044 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644792388 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_002943705 |
Protein GI | 239814795 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.970942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAGA CCGAACTGAT TGAGCACATC GCAAAGAACG CCGATATTTC CAAGGCAGCC GCCACCCGCG CGCTGGAATC CACCATCGGC GCCATTCGTA CCACGCTCAA AAAAGGCGGC TCGGTGTCGC TGGTCGGTTT CGGCACTTTC GCAGTCGGAA AAAGGGCCGC CCGCACCGGC CGCAATCCGC GCACCGGCGA CGCGATTAAA ATCAAGGCCG CCAAGATTCC GAAGTTCCGT CCGGGCAAGG CGTTGAAAGA CGCGCTGAAC TAA
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Protein sequence | MNKTELIEHI AKNADISKAA ATRALESTIG AIRTTLKKGG SVSLVGFGTF AVGKRAARTG RNPRTGDAIK IKAAKIPKFR PGKALKDALN
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