Gene Vapar_1784 details

Gene Information

• Locus tag: Vapar_1784
• ID: 7974526
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1922061
• End bp: 1922627
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644792383
• Product: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: YP_002943700
• Protein GI: 239814790
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.867637
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCTGGA CCCTCCCGAC CATCATGACC TGGACGCGCA TCGTCGCGAT TCCATTGATC 
GTTGGTGTGT TCTACCTGCC GATGGCCGAG CCGATGCGCA ACCTGATCGC CACGGTCATG 
TTCATCGTCT TCGCGGCCAC CGACTGGCTC GACGGCTTCC TGGCGCGCAA GCTCAACCAG 
ACCTCGGCCT TCGGCGCCTT CCTCGATCCG GTGGCCGACA AGTTCCTGGT CTGCGCCTCG 
CTGCTGGTGC TGGTGCACCT GAACCGCGCC GACGTGTTCG TGGCGCTGAT CATCATCGGC 
CGCGAGATCG CCATCTCGGC GCTGCGCGAG TGGATGGCGC AGATCGGCGC GAGCAAGAGC 
GTGGCGGTGC ACATGATCGG CAAGGTCAAG ACCACCGTGC AGATGGTCGC GATTCCGTTC 
CTGCTCTATG ACGGACGCCT CTTCAAGATC ATCGACACCG GCCTCTGGGG CCAGTGGCTG 
ATCTGGATCT CGGCCGTGCT CACGATCTGG TCGATGGTCT ATTACCTGCA GAAGGCCATT 
CCCGAAATCC GGGCCCGCGC CAAATGA 

 

Protein sequence

MFWTLPTIMT WTRIVAIPLI VGVFYLPMAE PMRNLIATVM FIVFAATDWL DGFLARKLNQ 
TSAFGAFLDP VADKFLVCAS LLVLVHLNRA DVFVALIIIG REIAISALRE WMAQIGASKS 
VAVHMIGKVK TTVQMVAIPF LLYDGRLFKI IDTGLWGQWL IWISAVLTIW SMVYYLQKAI 
PEIRARAK