Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1781 |
Symbol | |
ID | 7974523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1916355 |
End bp | 1917812 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792380 |
Product | hypothetical protein |
Protein accession | YP_002943697 |
Protein GI | 239814787 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGC CGACCCGCCG CCGTTCGCCA CTTTCCCTTG GTTTCTTTGC TCCCCCCGGC ATGGCGAGAA CCGTGCTCGC GCTTTCCCTG GCCCTGGGCG GCCTGGCCGG TGCCTCGGCG CAAACGACGC CGTCGCTGAC ACCGCAGCAG CAGCGCTTTC ACGACATCTA CAAGGAGCTG ATCGAGATCA ACACCAGCCA TTCGGCGGGC GACAACACGC TCGCGGCGCG CGCCATGGAA AAGCGGCTGG TCGAAGCGGG CTTTGCGCCC GGCGACATCC AGATCTTCGA GCCCTTCCCC AAGAAAGGCA ACCTGGTGCT GCGCTTCAAG GGCAACGGCA GCAAGAAGCC GCTGCTGCTG CTGGCCCACA TCGACGTGGT CGAGGCCCGG CGCGAGGACT GGAAGACCGA TCCGTTCAAG CTGCAGGAAA CCGGCGGCTA TTTCACGGCG CGCGGTTCGA TCGACGACAA GGCCATGGCC TCGGCGCTGG TGTCGGTGCT GGGGCAGCTC AAGCAGGAAG GCTTCAAGCC CAGCCGCGAC ATCATCCTGG CGCTGACGGC CGACGAAGAG CGCGGCGACG CGCTCAGCAA CGGCGCCTTC TGGCTCATCA ACAACAAGCC CGAGCTGCTG CAGGCGGAGT TCGGCATCAA CGAAGGCGGC GGCGGCGAAC TGCGCGGGGG CAAGCCCAAC CTGCACCGCA TGCAGGTGGC CGAGAAGATG TACACCACCT ACATGCTCGA GGCGCGCGAC GTCGGCGGCC ACAGCTCGGT GCCGACCAAA AGCAACCCGA TCTACGCACT GTCCGCGGGG CTCGAGCGCC TGGGCAGCTA CGCGTTCCCG GTCAAGCTGG GCGAGGTCAC CAAGACCTAT TTCGCACGCA GCGCGCCGTT TGCCACCGGC CAGCTGGCCG ACGACATGCG CGCCGTCGGC GGCGGCAACC CCGAGCCCGC GGTGATCGAG CGGCTCTCGG CCAACCCGGC CTACAACGCG CAGCTGCGCA CCACCTGCGT GGCGACCATG GTGCAGGCGG GCCATGCCGA GAACGCGCTG CCGCAGTCGG CCAAGGCCAC GGTCAACTGC CGCATCCTGC CGCACGACGA CCCGGACGAA GTCGAGCGCC TGCTGACCCA GGCCGTGGGC AACGACAAGA TCGTGGTGCG CAACCTCGGC AAGCCCTTGC GCAGCCCGGC CTCGCCGCTG AACGGCGACC TGGTGAAGAC CGTGGAATCG GTGACGCAGG CCATGTGGCC CGGCGTGCCG GTGGTGCCCG CGATGAGCAC CGGCGCCACC GACAGCCGCT TCATGCGCAA CGCCGGCATT CCGATGTATG GCGTGACGGG CATGTTCCTC GATCCCGCGG ATGCGCGCGC CCACGGGCTG GACGAGCGCA TCGAGATCCA GCGGCTCTAC GACGGCCGCG AGTTCCTGTA CCGGCTGGTG AGCGAGCTCG CCAGATAG
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Protein sequence | MRLPTRRRSP LSLGFFAPPG MARTVLALSL ALGGLAGASA QTTPSLTPQQ QRFHDIYKEL IEINTSHSAG DNTLAARAME KRLVEAGFAP GDIQIFEPFP KKGNLVLRFK GNGSKKPLLL LAHIDVVEAR REDWKTDPFK LQETGGYFTA RGSIDDKAMA SALVSVLGQL KQEGFKPSRD IILALTADEE RGDALSNGAF WLINNKPELL QAEFGINEGG GGELRGGKPN LHRMQVAEKM YTTYMLEARD VGGHSSVPTK SNPIYALSAG LERLGSYAFP VKLGEVTKTY FARSAPFATG QLADDMRAVG GGNPEPAVIE RLSANPAYNA QLRTTCVATM VQAGHAENAL PQSAKATVNC RILPHDDPDE VERLLTQAVG NDKIVVRNLG KPLRSPASPL NGDLVKTVES VTQAMWPGVP VVPAMSTGAT DSRFMRNAGI PMYGVTGMFL DPADARAHGL DERIEIQRLY DGREFLYRLV SELAR
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