| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1776 |
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| Symbol | |
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| ID | 7974518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1911421 |
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| End bp | 1912584 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792375 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002943692 |
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| Protein GI | 239814782 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGGCT CCGAACTGCT GCGCGTGATC GGCGCCCAGG TCTGCCTGCA CGCCACCATG
GCCGGCATGC GGCTCGCGAC CCCGCTGCTG GCGCTGCAAC TGGGCTACAG CGCAGCAGCC
GTCGGCGTGC TGATCGCGCT GTTCGCGCTC ACGCAGGTGT TCCTGGCACT GCCCGCGGGG
CGCTTTGCCG ACCGCTACGG ATTCAAGCGG CCGCTGTGGC TGTCGGTCAT TGCGGCTTCG
GCCGGCGCGG GACTCGTGCT CGCCTTTCCG ACCTTTCCGA TGATGTGCGT CGCGGCGCTG
CTGACCGGCG GCGCCACCGG CGCGACCGTC ATTGCGCTGC AGCGCCACGT GGGCCGCTCC
GCGACCAACG CCACGCAGCT CAAGCGCGTG TTCAGCTGGC TTGCGATAGC GCCCGCGGTT
GCCAATTTCA TCGGCCCGTT CGTCGCCGGC ATGCTCATCG ACCATGCGGG GCGAGCCCCT
GCGGACATGC TGGCGTTCCG GGTCTGCTTT GCGGTGATGG CGGCTTTTCC CATCGCCTGC
TGGCTGCTGG CGCGCGGCGC GCACGAACCG CCGCCTGCGG CACCCGCCGC CGGCGCCGCG
CCCACGCGCG CCTGGGACCT GCTGCGCGAG CCGATGTTCC GCCGCCTGCT GTTCGTGAAC
TGGCTGCAGT CGTCGAGCTG GGACGTGCAT GCCTTCGTGC TGCCGGTGCT GGGGCATGAC
CGCGGCATCA GCGCGTCGAT GATCGGTTCC ATCCTCGGCG CCTTCGCCAT TGCAGCGGCG
GCCATACGGG TGGTGCTGCC GCTGGTGGCC TCGCGCGCTT CGGAGCGCAG CGTGATCCTG
AGCTCCACGC TGGTCACGGC GCTGGTGTTC GCGGTCTATC CGCTGCTCGA TTCGGCCTGG
AGCATGGGCC TGTGCTCGGT GATCCTGGGC TTTGCGCTCG GCGCGGTGCA GCCGATGGTG
ATGAGCATGC TGCACCAGAT CACGCCGCAT GCGCGGCACG GCGAGGCGCT GGGCCTGCGC
CTCATGACCA TCAACGCCTC GAGCGTGGCC ATGCCGATGC TGTTCGGCTC GATCGGCGCG
CTGATCGGCA TCGCGGGCGT CTTCTGGGTG GTGGGCGGCG TGGTTGTGCT GGGGGCGCGG
GCGACCTGGG GCTTGAAGGT CTAG
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| Protein sequence | MKGSELLRVI GAQVCLHATM AGMRLATPLL ALQLGYSAAA VGVLIALFAL TQVFLALPAG
RFADRYGFKR PLWLSVIAAS AGAGLVLAFP TFPMMCVAAL LTGGATGATV IALQRHVGRS
ATNATQLKRV FSWLAIAPAV ANFIGPFVAG MLIDHAGRAP ADMLAFRVCF AVMAAFPIAC
WLLARGAHEP PPAAPAAGAA PTRAWDLLRE PMFRRLLFVN WLQSSSWDVH AFVLPVLGHD
RGISASMIGS ILGAFAIAAA AIRVVLPLVA SRASERSVIL SSTLVTALVF AVYPLLDSAW
SMGLCSVILG FALGAVQPMV MSMLHQITPH ARHGEALGLR LMTINASSVA MPMLFGSIGA
LIGIAGVFWV VGGVVVLGAR ATWGLKV
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