| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1774 |
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| Symbol | |
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| ID | 7974516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1909045 |
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| End bp | 1910031 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792373 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002943690 |
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| Protein GI | 239814780 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC CCAAGATCCT GGTCGCACGC GCGATCTTTC CCGAGACCAT CGAGCGCCTC
TCGCAGCATT TCGAAGTCGA GTCGAACCAG GCCGACGAAA GCTGGAGCAA GGAGCAGCTG
ATCGCCAGGC TGCAAGGCAA GCAGGGCGCC TTCACCACCG GCAGCGAGCG CATCGACGCC
GCGCTGCTCG ACGCCTGCCC CGACCTGAAG ATCTGCGCCA ACATGGCGGT GGGCTACAAC
AACTTCGACG TCGACGCCAT GGCCGCGCAC GGCGTGCTCG GCACCAATGC ACCCGACGTG
CTCACCGAGA CCACGGCCGA CTTCGGCTTT GCGCTGCTCA TGGCCACGGC CCGCCGCATC
ACCGAGAGCG AACACTTCCT GCGCGCTGGC AAGTGGCAGA AGTGGAGCTT CGACATGTTC
GCGGGCTCCG ACATCCACGG CGCCACGCTC GGCATCATCG GCATGGGCCG CATTGGCCAG
GGCATTGCCA AGCGCGGCGC GCACGGCTTC GGCATGAAGG TGGTCTACCA CAACCGTTCG
CGGCTCGACG CGGCGCTGGA GGCCGAATGC AAGGCCAGCT ACCTGAGCAA GGAAGAGCTG
CTCAAGACGG CGGACCACGT GGTGCTGGTG GTGCCGTACT CGCCGGCGTC GCACCACACC
ATCGGCGCGG CCGAGATCGC GCTGATGAAG CCGACCGCCA CGCTGGTGAA CATCGCGCGC
GGCGGCATCG TCGACGACGC GGCGCTGGCC GTGGCGCTGC GTGAGAAGCG CATTGCCGCG
GCGGGGCTCG ACGTGTTCGA GGGCGAACCC AAGGTCCACC CCGACCTGCT GACCGTGCCC
AACGTGGTGC TGACGCCGCA CATCGCGAGC GCCACCGTGC CCACGCGCCG CGCCATGGCC
GATCTCGCGG CCGACAACCT CATTGCCTGG TTCGGCGGCA AGGGCGCACT GACGCCCGTC
ACGCCTGTTC CGCCCGCCGC CAAGTAA
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| Protein sequence | MSKPKILVAR AIFPETIERL SQHFEVESNQ ADESWSKEQL IARLQGKQGA FTTGSERIDA
ALLDACPDLK ICANMAVGYN NFDVDAMAAH GVLGTNAPDV LTETTADFGF ALLMATARRI
TESEHFLRAG KWQKWSFDMF AGSDIHGATL GIIGMGRIGQ GIAKRGAHGF GMKVVYHNRS
RLDAALEAEC KASYLSKEEL LKTADHVVLV VPYSPASHHT IGAAEIALMK PTATLVNIAR
GGIVDDAALA VALREKRIAA AGLDVFEGEP KVHPDLLTVP NVVLTPHIAS ATVPTRRAMA
DLAADNLIAW FGGKGALTPV TPVPPAAK
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