| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1772 |
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| Symbol | |
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| ID | 7974514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1906374 |
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| End bp | 1907594 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792371 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_002943688 |
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| Protein GI | 239814778 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.182399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATTC ACAGCCTGCT CGACACCGAC CTCTACAAGT TCACCATGAT GCAGGTCGTG
CTGCATCACT TCCCGGGCGC CCAGGTCGAG TACCGGTTCA AGTGCCGCAA CCCCGGCATC
GACCTGGCGC AGTTCGCGGG GCAGATCCGC GAAGAGGTGC GAAGCCTCTG CTCGCTGCAG
TTCCGGGACG CCGAGCTGGC CTACCTGCGC TCGATGCGCT TCATCAAGAG CGACTTCGTC
GACTTCCTGG GCCTGTTCCG GCTCAACGAA AAGTACATCT CCATCACGCC CCAGCCCTCG
GGCGAGCTCG AGATCCGCAT CAAGGGGCCG TGGCTGCACA CCATCCTGTT CGAGATTCCG
GTGCTGGCCA TCGTGAACGA GGTCTACTTC CGCAACACGC AGAAGAAGCC CGACCTCGAG
GAAGGCCGGC GGCGCCTGGA GACCAAGATC GGGCAGCTGC AGGATGCCGG CCTGTCGGAC
CTCAAGATTG CCGACTACGG CACGCGCCGC CGCTTTTCCA AGGACTGGCA TGAAGAGGTG
CTGCGCACGC TGACCGCCAG GCTCGGTGCC GTCACCTCGC CGCCGGCGCA GGCCGAGCCC
GGTGCGCGGC TGCCCCAGCT CGCGGGCACC AGCAACGTGC TCTATGCGAT GAAGCTCGGC
CTGATTCCGC TCGGCACCAT GGCGCACGAA TACCTTCAGG CCTGCCAGGG GCTCGGCCCG
CGGCTGCGCG ACAGCCAGAT CTTCGGCTTC GAGAGCTGGG CCCGCGAATA CCGCGGCGAC
CTGGGCATTG CGCTGTCCGA CGTCTACGGC ATGAGCGCCT TCCTGCGCGA CTTCGACCTG
TACTTCTGCA AGCTGTTCGA CGGTGCGCGC CATGACAGCG GCGATCCGTT CCAGTGGGGC
GAGCGCATGC TGGCCCACTA CATCGCCAAC CGGGTCGATC CGCGCACCAA GACGCTGATC
TTCAGCGACA GCCTCACGGT GCCGCGCACT GTCGAGCTCT ACCAGCAGTT CCGCGGCCGC
TGCCAGCTGG CCTTCGGCAT CGGCACCAAT CTCACCAACG ACCTCGGCTA CGAGCCGCTG
CAGATCGTCA TCAAGATGAT CAACTGCAAC GGCCAGCCGG TGGCCAAGCT GTCGGACACG
CCTTCCAAGA ACATGTGCGA GGACGAAAAA TACCTGGCCT ACCTGCGCCA GGTGTTCGAG
ATCGAGCAGC CGCCGGCCTG A
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| Protein sequence | MIIHSLLDTD LYKFTMMQVV LHHFPGAQVE YRFKCRNPGI DLAQFAGQIR EEVRSLCSLQ
FRDAELAYLR SMRFIKSDFV DFLGLFRLNE KYISITPQPS GELEIRIKGP WLHTILFEIP
VLAIVNEVYF RNTQKKPDLE EGRRRLETKI GQLQDAGLSD LKIADYGTRR RFSKDWHEEV
LRTLTARLGA VTSPPAQAEP GARLPQLAGT SNVLYAMKLG LIPLGTMAHE YLQACQGLGP
RLRDSQIFGF ESWAREYRGD LGIALSDVYG MSAFLRDFDL YFCKLFDGAR HDSGDPFQWG
ERMLAHYIAN RVDPRTKTLI FSDSLTVPRT VELYQQFRGR CQLAFGIGTN LTNDLGYEPL
QIVIKMINCN GQPVAKLSDT PSKNMCEDEK YLAYLRQVFE IEQPPA
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