Gene Vapar_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1771 
Symbol 
ID7974513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1905964 
End bp1906197 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content62% 
IMG OID644792370 
ProductCsbD family protein 
Protein accessionYP_002943687 
Protein GI239814777 
COG category[S] Function unknown 
COG ID[COG3237] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.168396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGG ACACCATTGC AGGCAACTGG AAACAGCTCA AGGGCAAGGT CAAGGAGCAA 
TGGGGCAAGT TGACCGACGA TGACTTCGAC GTGATCGCCG GCAAGCGCGA CCAGCTGCTG
GGCCGCATCC AGGAACGCCA CGGCATCAGC CGCGACGAGG CCGAAAAACA GGTCCGGGAC
TGGGAAACGC GCGACGGCCG CACGCCGGAA GCGCTCTGGT ACGAGAAGTA CTGA
 
Protein sequence
MNKDTIAGNW KQLKGKVKEQ WGKLTDDDFD VIAGKRDQLL GRIQERHGIS RDEAEKQVRD 
WETRDGRTPE ALWYEKY