Gene Vapar_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1766 
Symbol 
ID7974508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1903341 
End bp1903892 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content63% 
IMG OID644792365 
Productphasin family protein 
Protein accessionYP_002943682 
Protein GI239814772 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.511087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGA CCGCTGACCA AATCCTCGCC GCCCAAAAAG CAAACCTCGA AACCCTGTTC 
GGCCTGACCA CCAAGGCCTT CGAAGGCGTC GAGAAGCTCG TCGAACTGAA CGTGACCGCC 
TCCAAGGCTG CGTTGAGCGA AGCTCAGAGC ACCGCCCAAG CCGCCCTGAA CGTCAAGGAC 
GCACAAGAGC TGCTGACGCT GCAAGCCAGC CTGTTCCAGC CCCTGGCCGA AAAGACCGCT 
GCCTACAGCC GTCACCTCTA TGACATCGCC CAGGGCACCG GCGCCGAGTT CACCAAGGCT 
TTCGAAGCCA AGGCTGCTGA AGCCCAGCAA ACCTTTGTCG GCCTGGTCGA CAGCGCTTCC 
AAGAATGCAC CCGCCGGCTC GGAAACCGCC GTTGCCGTGC TGAAGAGCGC CGTGGCTGCC 
GCCAACAACG CTTTCGAATC GGTCCAGAAG GCCGTCAAGC AAGCGTCGGA CGTTGCCGAA 
GCCAACTTCA ACGCCGTGTC GACGCAAGCC GTTGCCGCCG CCAAGACCGC GACCACCTCG 
CGCAAGCGCT AA
 
Protein sequence
MALTADQILA AQKANLETLF GLTTKAFEGV EKLVELNVTA SKAALSEAQS TAQAALNVKD 
AQELLTLQAS LFQPLAEKTA AYSRHLYDIA QGTGAEFTKA FEAKAAEAQQ TFVGLVDSAS 
KNAPAGSETA VAVLKSAVAA ANNAFESVQK AVKQASDVAE ANFNAVSTQA VAAAKTATTS 
RKR