Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1760 |
Symbol | |
ID | 7974502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1894373 |
End bp | 1895503 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644792359 |
Product | CBS domain containing membrane protein |
Protein accession | YP_002943676 |
Protein GI | 239814766 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.621716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGACCT CCCCGTTCCT GACCTACGCG CGCGCCTGGT TGCCGGGCCG CACCACCGTC GACATGCGCG AGAGGCTGCG CGCGGTCTGC GGGGCCGCCA TCGGCCTGCT CGTCACGGCC GTGCTGTGCC GCTGGCTGGC CGAGCCGCTG GGCAGCAGCG TCTGGCTGAT CGCGCCGCTG GGGGCCAGCG CCGTGCTGGT GTTCGCGGTG CCCGCGAGTC CGCTGGCGCA GCCCTGGTCG GTGATCGGCG GCAACACGCT GTCGGCGATG GTCGGCATCG CCAGCGTGAG CTGGATCCCC GACCCGGCGC TGAGCGCCGC GGTGGCGGTG GCCGCCGCCA TCGGCGTGAT GTTCTTCGCA CGCTGCCTGC ATCCGCCGGG CGGCGCGGCG GCGCTGCTCG CGGTGCTCAC GCACACCACG CACTTCTCGT CCGCCCTCTT TCCGTTCTTC ACCAATTCGC TGCTGCTGGT GCTGGCGGGC GTGGCCTACA ACTCGCTCAC GGGCAGGCGC TATCCGCATG TGCAGGTCGC GCAGCCGCCG CGCACCGATG CGCGCTTCAG CCAGGCCGAC ATCGATGCGG TGCTGGCGCG CTACAACCAG GTGCTGGACA TCAGCCGCGA CGACCTCGAA TCGCTGATCC AGCAGACCGA GCTCGAGTCG TACAAGCGCC GGCTCGGCAC CCTGCACTGC GGCGACATCA TGTCGCGCGA CCCGGTGTCG GTGGAGTTCG GCACGCCGCT GCAGGAGGCC TGGATGCTGA TGAACCAGCG CCGCATCAAG GCGCTGCCGG TCACCGACCG CACGCGCCGC GTGGTCGGCA TCGTGACGCA GGCCGACTTC TTCCGCCAGC TCGACCTGGA GCACCACGAA GGCATTGCCG GCCGCCTGCG CGACCTGATC CGCGCCACGC GCACCGTGGT GTCGAACAAG CCGGAGGTGG TGGGCCAGAT CATGACGCGC CAGGTGCGCG TGGCCAGCGC GGACCGCCCG GTGGTCGACC TGGTGCCGCT GTTCTCCGAG GGCGGCCACC ACCATATCCC CATCATCGAC CATGAAAAGC GGCTCACCGG CATGATCACG CAGTCGGATT TCGTGCGCGC CCTCTACCGT GCCGTGCGGC CGGAGAACTG A
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Protein sequence | MRTSPFLTYA RAWLPGRTTV DMRERLRAVC GAAIGLLVTA VLCRWLAEPL GSSVWLIAPL GASAVLVFAV PASPLAQPWS VIGGNTLSAM VGIASVSWIP DPALSAAVAV AAAIGVMFFA RCLHPPGGAA ALLAVLTHTT HFSSALFPFF TNSLLLVLAG VAYNSLTGRR YPHVQVAQPP RTDARFSQAD IDAVLARYNQ VLDISRDDLE SLIQQTELES YKRRLGTLHC GDIMSRDPVS VEFGTPLQEA WMLMNQRRIK ALPVTDRTRR VVGIVTQADF FRQLDLEHHE GIAGRLRDLI RATRTVVSNK PEVVGQIMTR QVRVASADRP VVDLVPLFSE GGHHHIPIID HEKRLTGMIT QSDFVRALYR AVRPEN
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