| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1758 |
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| Symbol | |
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| ID | 7974500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1893037 |
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| End bp | 1894023 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792357 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943674 |
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| Protein GI | 239814764 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.522879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACGA TCCTTCCTCC GATGACCCGC CGCGCCGTCC TGGGCTTCGG CACCTGCGCC
GCTGCGCTGG TGGCGTGCCC CGCGATCGCA CAGGGCTCCG ACAAGCCCGT CCGCTTCATC
CTGCCGATCA GCGCCGGCTC GGGCGTGGAC GCCATCGCGC GCGCGGCTTC GGTTGCACTC
GGCAAGGCCT TCGGCCAGCC GGTGGTGATC GAGAACCTGC CCGGCGCGGG CGGCATCACC
GGCACCTCGG CCGTCGTCAA GGCCGCGCCC GACGGGCTCA CGCTCGGCAT GGTGTCGAAC
AACCACGTCA TCAATCCGGC CGTGTACAAG AAGATGCCCT TCGACGCGCT CGGCGACGTC
ACGCCGATCA GCGTGGTGGG CGCGACGCCG CTGGTGCTGG TGGTCAATTC CAAGCTGCCC
GCGAAGAACG TGAAGGAACT GGTGGCGCTG CTGCGCGCCC GGCCCGAGAG CTACAACTAC
GCCTCGTCGG GCAACGGCAC CATCATCCAC CTGGCCGGCG AGATGTTCAT GGAAGAGGCC
GGCGTGAAGG CGCGCCACAT TCCCTACAAG GGCACCGGCC CGATGGTCAC CGACATGATC
GCGGGGCAGG TCGAGATGGG CGTGGTGGCG CTGCCCGCGG TGCAGCCGCA CCTCAAGAGC
GGCGCGCTGC GCGCCATCGG CCTGTGCGGC CCGGCACGCT CGCCGGCCGC GCCCGACATT
CCCACCATCG CCGAGCAGGG CCTGCCCAAC TACGTCGTGG AAGGCTGGTT CGCGGTGATC
GGCCCGCCGA AGATGCAGCC TGCCGACGTC CAGCGCGTGC ACGACGCCGT GGCCGCGGCC
TTCGCGAGCG CCGAGGTGCG TGAGGCCATG GACAAGCAGG GCAACATCAT CAAGCCCACC
TCGCCCGAGC AGGCCGCGAG CTACTTCCGC AGCGAGGCGG CGCGCTATGC GGCGCTGGTG
AAGAAGGCGA ACGTGGTGCT GGAGTGA
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| Protein sequence | MHTILPPMTR RAVLGFGTCA AALVACPAIA QGSDKPVRFI LPISAGSGVD AIARAASVAL
GKAFGQPVVI ENLPGAGGIT GTSAVVKAAP DGLTLGMVSN NHVINPAVYK KMPFDALGDV
TPISVVGATP LVLVVNSKLP AKNVKELVAL LRARPESYNY ASSGNGTIIH LAGEMFMEEA
GVKARHIPYK GTGPMVTDMI AGQVEMGVVA LPAVQPHLKS GALRAIGLCG PARSPAAPDI
PTIAEQGLPN YVVEGWFAVI GPPKMQPADV QRVHDAVAAA FASAEVREAM DKQGNIIKPT
SPEQAASYFR SEAARYAALV KKANVVLE
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