| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1754 |
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| Symbol | |
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| ID | 7974496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1888813 |
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| End bp | 1889712 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792353 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002943670 |
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| Protein GI | 239814760 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.744071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCGCA GAACCCTTCT CTCCGCCGCC GCGCTCGGCG CCGCCCTGTC GTTCGCTGCC
CTGGCGGCCC ATGCCGCCGA GCCGCTCAAG CTGGAGGTGT ACAACCCCGG CGCCAAGTCG
ATGTTCCCGG TGTCTTCCGA ACTGGTCATG GGCCAGGCCG ATGCCGTGCT GATCGACGCG
CAGTTCCAGC GTAACGACGC CGAGGCGCTG GTGCAGAAGA TCAAGGCCAG CGGCAAGAAG
CTGACCACGG TCTACATCAG CCACAGCGAC CCCGACTACT ACTTCGGCCT CGACGTGATC
CAGGCCGCGT TCCCCGACGC AAGGATCGTC GCCACGCCGC AGACCGTGGC AGCCATCCAG
GCCTCCAAGG ACGGCAAGCT CGCGCACTGG GGCCCGATCC TGAAGGACAA CGCGCCCAAG
GCGCTGGTCG TGCCCGAGCC GCTGGCCGGC GACAGCATCA CGCTCGAAGG CCGCAAGATC
CATGTCGTCG GCCTCGACGG CCCCACGCCC GAACGCACCT TTGCATGGAT CCCCTCGCTC
AAGGCGGTGG TCGGCGGCAT TCCGGTCTCG GCCAACATCC ATGTGTGGGT GGCCGACACG
CAGACGCCCG CCTCGCGCCG CGACTGGATC AAGACCCTCG GCCGCATCGA GGCGCTGCGC
CCGAAGACCG TGGTGCCCGG CCACTACCTT CCGAATGCGG ACGGCAGTGC GCCCTACGCG
CTCGCCTCGG TGAAGTTCAC GCGCAGCTAC CTGCAGGCCT TCGAGACCGA GGCGAAGAAG
GCCGCGGACT CGGCCGCGCT CATTGCCGCG ATGAAGAAGC GCTACCCGAA GCTCGAAGGC
GCCTCGTCGC TCGAACTGGG CGCCAAGGTC ATCAAGGGAG AAATGAAGTG GCCGCAGTGA
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| Protein sequence | MFRRTLLSAA ALGAALSFAA LAAHAAEPLK LEVYNPGAKS MFPVSSELVM GQADAVLIDA
QFQRNDAEAL VQKIKASGKK LTTVYISHSD PDYYFGLDVI QAAFPDARIV ATPQTVAAIQ
ASKDGKLAHW GPILKDNAPK ALVVPEPLAG DSITLEGRKI HVVGLDGPTP ERTFAWIPSL
KAVVGGIPVS ANIHVWVADT QTPASRRDWI KTLGRIEALR PKTVVPGHYL PNADGSAPYA
LASVKFTRSY LQAFETEAKK AADSAALIAA MKKRYPKLEG ASSLELGAKV IKGEMKWPQ
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