Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1754 |
Symbol | |
ID | 7974496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1888813 |
End bp | 1889712 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792353 |
Product | beta-lactamase domain protein |
Protein accession | YP_002943670 |
Protein GI | 239814760 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.744071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGCA GAACCCTTCT CTCCGCCGCC GCGCTCGGCG CCGCCCTGTC GTTCGCTGCC CTGGCGGCCC ATGCCGCCGA GCCGCTCAAG CTGGAGGTGT ACAACCCCGG CGCCAAGTCG ATGTTCCCGG TGTCTTCCGA ACTGGTCATG GGCCAGGCCG ATGCCGTGCT GATCGACGCG CAGTTCCAGC GTAACGACGC CGAGGCGCTG GTGCAGAAGA TCAAGGCCAG CGGCAAGAAG CTGACCACGG TCTACATCAG CCACAGCGAC CCCGACTACT ACTTCGGCCT CGACGTGATC CAGGCCGCGT TCCCCGACGC AAGGATCGTC GCCACGCCGC AGACCGTGGC AGCCATCCAG GCCTCCAAGG ACGGCAAGCT CGCGCACTGG GGCCCGATCC TGAAGGACAA CGCGCCCAAG GCGCTGGTCG TGCCCGAGCC GCTGGCCGGC GACAGCATCA CGCTCGAAGG CCGCAAGATC CATGTCGTCG GCCTCGACGG CCCCACGCCC GAACGCACCT TTGCATGGAT CCCCTCGCTC AAGGCGGTGG TCGGCGGCAT TCCGGTCTCG GCCAACATCC ATGTGTGGGT GGCCGACACG CAGACGCCCG CCTCGCGCCG CGACTGGATC AAGACCCTCG GCCGCATCGA GGCGCTGCGC CCGAAGACCG TGGTGCCCGG CCACTACCTT CCGAATGCGG ACGGCAGTGC GCCCTACGCG CTCGCCTCGG TGAAGTTCAC GCGCAGCTAC CTGCAGGCCT TCGAGACCGA GGCGAAGAAG GCCGCGGACT CGGCCGCGCT CATTGCCGCG ATGAAGAAGC GCTACCCGAA GCTCGAAGGC GCCTCGTCGC TCGAACTGGG CGCCAAGGTC ATCAAGGGAG AAATGAAGTG GCCGCAGTGA
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Protein sequence | MFRRTLLSAA ALGAALSFAA LAAHAAEPLK LEVYNPGAKS MFPVSSELVM GQADAVLIDA QFQRNDAEAL VQKIKASGKK LTTVYISHSD PDYYFGLDVI QAAFPDARIV ATPQTVAAIQ ASKDGKLAHW GPILKDNAPK ALVVPEPLAG DSITLEGRKI HVVGLDGPTP ERTFAWIPSL KAVVGGIPVS ANIHVWVADT QTPASRRDWI KTLGRIEALR PKTVVPGHYL PNADGSAPYA LASVKFTRSY LQAFETEAKK AADSAALIAA MKKRYPKLEG ASSLELGAKV IKGEMKWPQ
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