Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1750 |
Symbol | |
ID | 7974492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1884876 |
End bp | 1885637 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792349 |
Product | ABC transporter related |
Protein accession | YP_002943666 |
Protein GI | 239814756 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.272511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGA CCGTGCTTTC GACACAGGGC CTGGTGATGC GCTTCGGCGG CATCACGGCC ACCAACAACG TCACGATGGA GCTCAAGCGC GGCGCGCGCC ATGCGCTGAT CGGCCCCAAC GGTGCCGGCA AGACCACGCT CATCAACCTG CTGACGGGCG TGCTCGTGCC CACCGAAGGC CGCATCTCGC TGCTCGGCGA AGACATCACC ACGCTCGCGC CGCACAAGCG CGTGGCGCGC GGCCTGGTGC GCACCTTCCA GATCAACCAG CTGTTCGACT CGATGACGCC GCTCGAAACA CTGGCGCTCG TGGTCTCGCA GCACCAGGGC ATCGCCTCGC AATGGTGGCG CCCGCTGGGG TCCAGCAAGG CCGTGACGGA GCGCGCGGCG CAGCTGCTCG AGCAGTTCCA CCTCGGCGAC GTGGCGCAGC AGCAGACGAA GTTCATGGCC TACGGCAAGC GACGCCTGCT CGAGATTGCG ATTGCGCTGG CCTGCGAGCC GCGCGTGCTG CTGCTCGACG AACCGGTGGC GGGCGTTCCC GCCGGCGAGC GCGAGGAGCT GCTGCAGACG GTGGCCGCAT TGCCGGCCGA CGTGTCGGTG CTCTTGATCG AGCACGACAT GGACCTGGTG TTCAGCTTTG CCGACCGCAT GACGGTGCTG GTCAACGGCA CCTTGCTGAC GGAAGGCGAC CCCGAAACCA TCGCCAACGA TCCGAAGGTG AAAGAGGTCT ACCTGGGCCA TGGAGATGCC GTTCATGTCT GA
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Protein sequence | MTETVLSTQG LVMRFGGITA TNNVTMELKR GARHALIGPN GAGKTTLINL LTGVLVPTEG RISLLGEDIT TLAPHKRVAR GLVRTFQINQ LFDSMTPLET LALVVSQHQG IASQWWRPLG SSKAVTERAA QLLEQFHLGD VAQQQTKFMA YGKRRLLEIA IALACEPRVL LLDEPVAGVP AGEREELLQT VAALPADVSV LLIEHDMDLV FSFADRMTVL VNGTLLTEGD PETIANDPKV KEVYLGHGDA VHV
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