| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1728 |
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| Symbol | |
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| ID | 7974470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1859328 |
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| End bp | 1860302 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792327 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943644 |
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| Protein GI | 239814734 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000138384 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGA AACGACGTGA TCTGATGCTA GGCGCCCTGG GCGGCGGGGT GCTCGCGGCC
GGTGGCGTGC ATGCCGCGGA CAACTGGCCG TCCAGGCCGG TGCGCATCGT GGTGCCGTAC
CCGCCGGGCG GTTCGTCCGA CATCATTGCC CGCTCCATCA GCCAGCCGCT GTCGGAAGCG
CTGGGCCAGC CGGTCATCGT CGACAACAAG CCGGGCGCCA ACGGCAACCT CGGCGCCGAT
TTCGTCGCCA AGTCCAAGCC CGATGGCTAC ACGCTGCTGC TGTGCGACGT CGGCGCGCTC
GCCATCAGCC CCTCGGTCTA CACGCGGCTG CCTTTCGATC CTTCCAAGGA CCTGCGCGGC
GTAACCATGC TGGCCTATTC GCCGCACCTC TTGGTGGTGC ATCCCTCGGT CCAGGCCAAC
AACCTGAAGG AACTGATCGC GCTGTCGAAG AAGTCGGAAA TCAACTTCGC CGTCACCGCC
ACCGGCAGTG CGCCGCACCT GGCCGGCGTG GCGCTGGAGC GTGCGAGCGG CGCACGCTGG
CAGTACGTGC CCTACAAGGG CGGCGTGCAG GCGGTGCAGG ACACGGTCGC CGGCCAGACG
CAGATCCTGA TGAACGGCAT GCTCGCCACG CTGCCGCATG TGCAGAGCGG CAAGCTCAAG
GTGCTCGGCG TGTCGAAAGC GACGCGCATG CCGCTGATCG GCGAAGTGCC CACCATCGCG
GAGCAGGGCG TGGCCGGCTT CGAGTCGGGC ACCTGGCAGG GCGTGCGCGT GGCCAGGGGC
ACGCCCGACG CCATCGTGCA GCGCCTCAAC AAGGAACTGA TCACCGTCAT CCGCACGGCC
GACATCCGCT CGCGCCTCGC GGGGCAGGGC GCCGAGGTCG TGACCATGGC GCCGGCCGAG
GAAGAGCAGT TCTTCGGCAA GGAGCGCGCG CGCTGGGCCA AGGTCGTTGC CGACGCCGGC
ATCAAGCTGG ACTGA
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| Protein sequence | MSLKRRDLML GALGGGVLAA GGVHAADNWP SRPVRIVVPY PPGGSSDIIA RSISQPLSEA
LGQPVIVDNK PGANGNLGAD FVAKSKPDGY TLLLCDVGAL AISPSVYTRL PFDPSKDLRG
VTMLAYSPHL LVVHPSVQAN NLKELIALSK KSEINFAVTA TGSAPHLAGV ALERASGARW
QYVPYKGGVQ AVQDTVAGQT QILMNGMLAT LPHVQSGKLK VLGVSKATRM PLIGEVPTIA
EQGVAGFESG TWQGVRVARG TPDAIVQRLN KELITVIRTA DIRSRLAGQG AEVVTMAPAE
EEQFFGKERA RWAKVVADAG IKLD
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