Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1719 |
Symbol | |
ID | 7974461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1850239 |
End bp | 1851219 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792318 |
Product | hypothetical protein |
Protein accession | YP_002943635 |
Protein GI | 239814725 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0711752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAA GCAGATTCCT TGGCGGCCTC GCCACCCTTT CGGCTGCGGC CGCCCTGTCG CTCGGGTTCG CCGCGACTGC CGCGGCGCAG GCCGGCGACT TTCCGAACCG CACGATCGAG CTGCTGGTGC CCTACCAGCC GGGCGGCGGC ACCGACGGCC TGGCGCGCGC CTTCTCCGAG GCCAGCCGCA AGCACATTTC GCAGAGCATC GTGATCGTCA ACCGTCCGGG CGCGGGCGGC GCCATCGGCT GGACCGAGGT GATCAACGCC CGGCCCGACG GCTACAAGCT CGCGGTGCTC ACGGTGGAAC TGCTGACGCT GCCGCACCTG GGCCTGGCCA AGTTCAACTA CGACGACTTC CAGCCGATCG CGCAGCTCAA TGCCGACCCG GCCGCCATCA CCGTCAAGGC CGATGCGCCG TGGAACACGA TCGAGGAATT CCTCGCGGCG GCGAAGAAGT CGCCCGAGAG CGTGCGCGTC GGCAATTCGG GCAACGGTTC GATCTGGCAC CTGGCCGCCG CGGCGCTCGA GGACAAGACC GGCGCCAGGT TCGGCCACAT CCCGTTCCAG GGTGCGGCGC CCGCGGTGCT GGCGCTGCTG GGCGGGCACA TCGAGGCCGT GGCGGTGAGC CCGGCCGAGG TCACGACGCA TGTGCAGTCC GGCAAGCTCA AGGTGCTGAT GGTCATGGCC GACAAGCGCG TGAAGGGCTT CGACAAGGTG CCCACCGCCA AGGAGCGCGG CATCGACCTG TCGATCGGCA CCTGGCGCGG CCTCGGCGCC CCCAAGAACA CGCCGCCCGA AGTGATGGCC AAGCTGCGCG AGATCACGGC CAAGACGGCC GCCGAGCCGC TCATGCACGA GGTGATGGAC CGGCAGAACC TCGGCTACGT CTACACGGAC GGCGCGGTGT TCAAGGAAAC CCTGGCCAAG GACAACGCCT ACTTCAAGGC GCTGATCGCC AAACTGAACA TCAAGCCATG A
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Protein sequence | MKRSRFLGGL ATLSAAAALS LGFAATAAAQ AGDFPNRTIE LLVPYQPGGG TDGLARAFSE ASRKHISQSI VIVNRPGAGG AIGWTEVINA RPDGYKLAVL TVELLTLPHL GLAKFNYDDF QPIAQLNADP AAITVKADAP WNTIEEFLAA AKKSPESVRV GNSGNGSIWH LAAAALEDKT GARFGHIPFQ GAAPAVLALL GGHIEAVAVS PAEVTTHVQS GKLKVLMVMA DKRVKGFDKV PTAKERGIDL SIGTWRGLGA PKNTPPEVMA KLREITAKTA AEPLMHEVMD RQNLGYVYTD GAVFKETLAK DNAYFKALIA KLNIKP
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