| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1717 |
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| Symbol | |
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| ID | 7974459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1848118 |
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| End bp | 1849110 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792316 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943633 |
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| Protein GI | 239814723 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.169515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCC GCACATTGAT TCGCACCGCC CTCGCCTCTT CGCTCGCCGC GGGCCTGCCC
GCGTTCGCGC AGGGCCCCGG CAACTGGCCC ACGGGCAAGG CCATCACCTA CCTCGTGCCC
TTTCCCGCGG GCGGCACCAC CGACGTGCTG GCCCGCCTGA TCGGCCAGAA GCTCGGCCCG
GTGCTGGGCA CGAGCGTGAT CATCGACAAC AAAGGCGGCG CCGGCGGCAG CGTGGGCTCG
GAAATCGGCT CGCGCGCAGC GCCCGACGGC TTCATGATGG TGGGCGGCAC GATCAGCTCG
CACGCGATCA ACGTGAGCCT GTATCCGAAG CTCGGCTACG ACCCGCAGAA GTCGTTCGCG
CCGGTGACGC TGATCGGCAC CAACCCGCTG GTGCTGGTGG TCAACCAGGC CAGCCCCTAC
AAGACGCTGA AGGACGTGCT GGAAGCCAGC AAGACCAAGT CGGGCGGGCT CTCGTCGGCC
TCGGCCGGCA CCGGCACCTC GCAGCACCTG TCGCTCGAGC TGCTGGCGTT CAAGTCGGGC
GTGAAGTTCA CGCACATTCC CTACAAGGGG AGCGGCCCGG CGATCCAGGA CGTGATCGGC
GGGCAGGTCG ACATGATGTT CGACACCACC GTGGTGGCGG GTCCGCACAT CCAGAGCGGC
AAGCTGCGCG CCATTGCCGT GACCTCGGCC AAGCGCCTGG CCTCGATGCC CGACGTGCCG
ACGGTCGCGG AATCCGGCAT TGCGGGATTG CAGGACTTCG AGGTGCTGTC GTGGCAGGCG
ATCTTCGTGC CCGCGGGTAC GCCGGCGCCC ATCGTCGAGC GGCTGCACAC CGAGATCCGC
AAGATCCTCG CAACGCCCGA GATGCAGGAA AAGCTCAAGG GCTTCGGCAT GGAGCCGGCC
GACCTCTCCA CGGCAAAGAT CGCGGCCTTC CAGAAGGCCG AGGTCGAGAA GTGGGCGCAG
GTGATCAAGG CCGCGGGCAT CAAGGCGGAC TGA
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| Protein sequence | MQRRTLIRTA LASSLAAGLP AFAQGPGNWP TGKAITYLVP FPAGGTTDVL ARLIGQKLGP
VLGTSVIIDN KGGAGGSVGS EIGSRAAPDG FMMVGGTISS HAINVSLYPK LGYDPQKSFA
PVTLIGTNPL VLVVNQASPY KTLKDVLEAS KTKSGGLSSA SAGTGTSQHL SLELLAFKSG
VKFTHIPYKG SGPAIQDVIG GQVDMMFDTT VVAGPHIQSG KLRAIAVTSA KRLASMPDVP
TVAESGIAGL QDFEVLSWQA IFVPAGTPAP IVERLHTEIR KILATPEMQE KLKGFGMEPA
DLSTAKIAAF QKAEVEKWAQ VIKAAGIKAD
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