| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1711 |
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| Symbol | |
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| ID | 7974453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1842024 |
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| End bp | 1843160 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792310 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_002943627 |
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| Protein GI | 239814717 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.926786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACAA AACGCGACTA CTACGAAACC CTCGGCGTTC CCAAGAACGC GAGCGAGGAG
GAAATCAAGA AGGCTTATCG CAAGCTTGCG ATGAAGCACC ACCCGGACCG CAACCACGGC
GATACCACCA AGGACGCCGA GACCAAGTTC AAGGAGGTCA AGGAAGCCTA CGAAATGCTG
TCTGACGCGC AGAAGCGCGC GGCCTACGAC CAGTACGGCC ACGCCGGCGT CGACCCCAAC
ATGCGCGGCG GCCCCGGTGC CGAAGGCTTC GGCGGCTTTG CGGAGGCCTT TGGCGACATC
TTCGGCGACG TGTTCGGCGG CGCGCGCGGG CGCACCAGCG GCGGGCGCCA GGTGTTCCGC
GGCAGCGACC TGAGCTATGC GATGGAGGTC ACGCTGGAAG AAGCGGCCGA GGGCAAGGAA
GCGCAGATCC GCATCCCGAG CTGGGACGAC TGCGGCACCT GCAAGGGCAC CGGCGCCAAG
CCTGGCACCA AGCCCATCAC CTGCACCACC TGCCACGGCG CCGGCGCCGT GCAGATGCGC
CAAGGCTTCT TCAGCGTGCA GCAGACCTGC CCGACCTGCC ACGGCAGCGG CAAGATCATT
CCCGAGCCCT GCACCGTGTG CCATGGCCAG GGCAAGATCA AGAACAACAA GACGCTCGAG
GTCAAGATCC CGGCCGGCAT CGACGACGGC ATGCGCATCC GCAGCACCGG CAACGGCGAA
CCGGGCACCA ACGGCGGGCC GCCGGGCGAC CTGTATATCG AGATCCGGCT CAAGAAGCAC
GAGCTGTTCG AGCGCGATGG CGACGACCTG CACTGCGTCG TGCCCGTGAG CATGACCACC
GCGGCGCTGG GCGGCGAGAT CAGCGTGCCC ACGCTCAAGG GCGCCGCCGC CATCGACATT
CCCGATGGCA CCCAGAGCGG CAAGCAGTTC CGCCTGCGCG GCAAGGGCAT CAAGGGCGTG
CGCTCCAGCT ATCCGGGCGA CCTGTACTGC CACGTGCGCG TCGAAACGCC GGTCAAGCTC
ACCGAGCACC AGCGCAAGCT GCTCAAGGAG CTGGACGAAT CGCTCAAGAA GGGCGGCGAC
AAGCACAGCC CGACCGACAA GGGCTGGTTC GACAAGGCCA AGGAATTCTT CAGCTGA
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| Protein sequence | MATKRDYYET LGVPKNASEE EIKKAYRKLA MKHHPDRNHG DTTKDAETKF KEVKEAYEML
SDAQKRAAYD QYGHAGVDPN MRGGPGAEGF GGFAEAFGDI FGDVFGGARG RTSGGRQVFR
GSDLSYAMEV TLEEAAEGKE AQIRIPSWDD CGTCKGTGAK PGTKPITCTT CHGAGAVQMR
QGFFSVQQTC PTCHGSGKII PEPCTVCHGQ GKIKNNKTLE VKIPAGIDDG MRIRSTGNGE
PGTNGGPPGD LYIEIRLKKH ELFERDGDDL HCVVPVSMTT AALGGEISVP TLKGAAAIDI
PDGTQSGKQF RLRGKGIKGV RSSYPGDLYC HVRVETPVKL TEHQRKLLKE LDESLKKGGD
KHSPTDKGWF DKAKEFFS
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