| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1710 |
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| Symbol | |
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| ID | 7974452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1839441 |
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| End bp | 1841363 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644792309 |
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| Product | putative serine protein kinase, PrkA |
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| Protein accession | YP_002943626 |
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| Protein GI | 239814716 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2766] Putative Ser protein kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.376302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTGA TCAGCAACTT TGCCGCCCGT TACGAGCGCA CCCGCGAGGA AGTTCTCTCG
CTGCAGGACT TCCTGGATAT CTGCAAACGC GACCCCACCG CGTATGCCAC TGCGTCCGAG
CGGATGCTCA AGGCCATCGG CGAACCCGAG CTGGTCGACA CGCGCAACGA TTCCCGGCTT
TCGCGGATCT TCGCGAACAA GGTCATCAAG ATCTACCCGG CGTTCAAGGA GTTCTACGGC
ATGGAGGACG CCATCGAGCA GGTGGTGTCG TACTTCAGGC ATGCCGCGCA GGGCCTGGAG
GAAAAGAAGC AGATCCTCTA TCTGCTCGGC CCGGTCGGCG GCGGCAAGAG CTCGATCGCC
GAGCGCCTGA AGCAGCTCAT GGAGCATGTG CCCTTCTATG CCATCCAGGG TTCGCCGGTC
AACGAGACGC CGCTCGGCCT GTTCGACGCC GCCGAAGATG GCGAGATCCT CGAAAAGGAA
TACGGCATCC CGCGCCGCTA CCTGAACCGC ATCCTCTCGC CCTGGGCCGT GAAGCGGCTC
GAGGAGTACG GCGGCGACAT CCGCCAGTTC AAGGTGGTCA AGCGCTACCC GTCGGTACTG
CGGCAGATCG CCGTGGCCAA GACCGAGCCG GGCGACGAGA ACAACCAGGA CATCTCCTCG
CTGGTCGGCA AGATCGACAT CCGCAAGCTC GAGACCTATG CGCAGGACGA CCCCGACGCC
TACGCCTATT CGGGCGGCCT GTGCCTGGCC AACCAGGGCC TGCTGGAGTT CGTGGAAATG
TTCAAGGCGC CCATCAAGGT GCTGCACCCG CTGCTCACGG CCACGCAGGA AAGCAACTTC
AAAGGGACCG AGGGCTTCGG CGCCATTCCG TTCGACGGCA TCGTGCTGGC GCACAGCAAC
GAGAGCGAAT GGAAGGCCTT CCGCAACAAC AAGAACAACG AGGCTTTCCT CGACCGCATC
TACATCGTCA AGGTGCCCTA CTGCCTGCGC GCCTCCGAAG AAATCAAAAT CTACGAGAAG
CTGGTGCGCA ACTCGTCGCT CGCCAAGGCG CCCTGCGCCC CGGGCACGCT GCGCATGATG
GCGCAGCTCT CGGTGCTCAC GCGGCTGAAG GAGCCCGAGA ACTCGAGCAT CTACAGCAAG
ATGCAGGTCT ACGACGGCGA GAACCTCAAG GACACCGACC CCAAGGCCAA GTCGATCCAG
GAATACCGCG ACTACGCCGG CGTCGACGAA GGCATGAGCG GCGTCTCGAC CCGCTTCGCG
TTCAAGATCA TCTCGAAGGT GTTCAACTTC GACAGCTCCG AGGTGGCCGC CAACCCGGTG
CACCTGATGT ACGTGCTCGA GCAGCAGATC GAGCGCGAGC AGTTTCCGCC GGAAACCGAG
CAGAAGTACA TCAGCTACAT CAAGGAGCTG CTGGCGCCGC GCTACGCGGA ATTCATCGGC
AAGGAAATCC AGACCGCCTA CCTGGAGAGC TACAGCGAGT ACGGCCAGAA CATCTTCGAC
CGCTACGTCA CCTATGCCGA CTACTGGATC CAGGACCAGG AGTTCCGCGA CGTGGACACC
GGCGAAGTGT TCGACCGCGC CTCGCTCAAC GCCGAGCTCG AGAAGATCGA ACGGCCCGCG
GGCATCGGCA ATCCGAAGGA CTTCCGCAAC GAGATCGTCA ACTTCGTGCT GCGCGCGCGC
GCCGGCAACG CCGGCCGCAA CCCGGCCTGG ACCAGCTACG AGAAGCTGCG CGCGGTGATC
GAGAAGAAGA TGTTCTCCAA CACCGAGGAA CTCCTGCCGG TGATCAGCTT CAACACCAAG
AGCAGCGCCG ACGAGCAGAA GAAGCACGAG GACTTCGTGA CCCGCATGGT CGAGAAAGGC
TATACGGCCA AGCAGGTTCG CCTGCTCTGC GAGTGGTACC TGCGCGTGCG CAAGAGTTCA
TAG
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| Protein sequence | MDVISNFAAR YERTREEVLS LQDFLDICKR DPTAYATASE RMLKAIGEPE LVDTRNDSRL
SRIFANKVIK IYPAFKEFYG MEDAIEQVVS YFRHAAQGLE EKKQILYLLG PVGGGKSSIA
ERLKQLMEHV PFYAIQGSPV NETPLGLFDA AEDGEILEKE YGIPRRYLNR ILSPWAVKRL
EEYGGDIRQF KVVKRYPSVL RQIAVAKTEP GDENNQDISS LVGKIDIRKL ETYAQDDPDA
YAYSGGLCLA NQGLLEFVEM FKAPIKVLHP LLTATQESNF KGTEGFGAIP FDGIVLAHSN
ESEWKAFRNN KNNEAFLDRI YIVKVPYCLR ASEEIKIYEK LVRNSSLAKA PCAPGTLRMM
AQLSVLTRLK EPENSSIYSK MQVYDGENLK DTDPKAKSIQ EYRDYAGVDE GMSGVSTRFA
FKIISKVFNF DSSEVAANPV HLMYVLEQQI EREQFPPETE QKYISYIKEL LAPRYAEFIG
KEIQTAYLES YSEYGQNIFD RYVTYADYWI QDQEFRDVDT GEVFDRASLN AELEKIERPA
GIGNPKDFRN EIVNFVLRAR AGNAGRNPAW TSYEKLRAVI EKKMFSNTEE LLPVISFNTK
SSADEQKKHE DFVTRMVEKG YTAKQVRLLC EWYLRVRKSS
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