| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1709 |
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| Symbol | |
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| ID | 7974451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1838079 |
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| End bp | 1839371 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792308 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943625 |
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| Protein GI | 239814715 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2718] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0614013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCATCC TGCAGCAGAT CATCGACCGC CGGCTTTCGG GCAAGAACAA GTCCATTGGC
AACCGCGAGC GCTTCCTCAG GCGCTACCGA GGGCAGATCC AGGAGGCTGT GCGGCGCGCG
GTCAGCGGGC GCAACATCCG CGAACTGGAG CAAGGCGAAG ATGTCACCCT GCCGCGCCAC
GACGTGTCCG AACCCGTCTT CGGCCATGCC CGCGGCGGCG ACCGCGAGTA CGTGCACCCG
GGCAATCAGG AATACCTGAA GGGCGACCGC ATTGCGCGTC CGGAGGGGCA GGCCGGCGGC
GGCTCGGGAA GCGGCGAGGC CGCAGACAGC GGCGAAGGCG AGGACGACTT CGTCTTCCGC
CTCACGCGCG AGGAGTTCAT GCGCGTGTTC TTCGATGACC TGGCGCTGCC GCACCTCATC
CGCACCCAGA TCGCCGAGGT GCCCGAATGG AAGAGCCACC GGGCCGGCTT CACGAGCGAT
GGCTCGCCCA ACAACCTGCA CGTGGTGCGC TCGATGCGCG GCGCCCTGGC GCGGCGCATC
GCGCTGGGCG GCGAGCCGCG CAAGGAGCTG CGCCGACTGG AGACGCACCT GCTGCACCTG
CGGCAGCATC CGCAGGTCGA GCAGCCCTTG ATCCAGAAGG AAATCCTCGA GACCGAGGAG
CGGATCGCCG AGTTGCGCCG CACCTCGCGC CACGTGCCCT ACATCGATCC GATCGACCTG
CGCTACCGCA ACCGCGTGAA GACGCCCGTG CCCAGCGCCA AGGCCGTGAT GTTCTGCCTC
ATGGACGTGT CGGGATCGAT GGACGAGGCG CGCAAGGACA TGGCCAAGCG CTTCTTCATG
CTGCTGTACA TGTTCCTCAC GCGGCACTAC GAAACCATCG ACCTCGTGTT CCTGCGCCAC
CACACGCAGG CGCAGGAAGT CACCGAGGAA GAGTTCTTCC ATGCCACCGA AACCGGCGGC
ACCGTGGTGT CGAGCGCGCT GGTGCTGATG GACGAGATCA TCAAGGCGCG CTATCCAAGC
GGCGAGTGGA ACGTCTACGG CGCGCAGGCG AGCGACGGCG ACAACTGGCA CCAGGACAGC
GGGCGCTGCC GCGAGCTGCT GGTCGACCAC ATCCTGCCGG TGGTGCGCTA CTACGCCTAT
GTGCAGGTGG CCGAGACCGA GCAGAACCTG TGGCAGGAAT ACGCGCAGCT CGAAGGCATC
GAGCCCAATT TTGCGATGCG CAAGGTCTCC GACGCGCGGG ACATCTACCC CGTCTTCCGC
GACCTCTTCA AGAAGGAGGG AGTGCCCGCA TGA
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| Protein sequence | MAILQQIIDR RLSGKNKSIG NRERFLRRYR GQIQEAVRRA VSGRNIRELE QGEDVTLPRH
DVSEPVFGHA RGGDREYVHP GNQEYLKGDR IARPEGQAGG GSGSGEAADS GEGEDDFVFR
LTREEFMRVF FDDLALPHLI RTQIAEVPEW KSHRAGFTSD GSPNNLHVVR SMRGALARRI
ALGGEPRKEL RRLETHLLHL RQHPQVEQPL IQKEILETEE RIAELRRTSR HVPYIDPIDL
RYRNRVKTPV PSAKAVMFCL MDVSGSMDEA RKDMAKRFFM LLYMFLTRHY ETIDLVFLRH
HTQAQEVTEE EFFHATETGG TVVSSALVLM DEIIKARYPS GEWNVYGAQA SDGDNWHQDS
GRCRELLVDH ILPVVRYYAY VQVAETEQNL WQEYAQLEGI EPNFAMRKVS DARDIYPVFR
DLFKKEGVPA
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