| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1705 |
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| Symbol | |
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| ID | 7974773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1834460 |
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| End bp | 1835323 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792304 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943621 |
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| Protein GI | 239814711 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0851207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTCG TCACCGATGA CCCCAACATG CTCGACGACT GGCTGGTCGC AGGCCCCGCG
GCCGCGCTCG CCGGCAGCTC CGAAGCGCGG CCCCGCGCAG TTCGCCTGCT CGGCGAAACG
CTGCAGCTGT GGACCGATGA CGCCGACATG CCGCAATGCC GGCTCGGCAC ACGCGCGCTC
TCGGTCCAGG CGCGCCACGG CCATCTCTGG GTCTGCCCGA GCGGCCGGCC CGCACGGCCG
CTGTTCGACT TTCCCGAATA CGGCGAAGCC GGGCGCCGCA TCATCGACTG CGGCGCCATC
GGCGTGGCGG TGTCGGGCTT GCGCGTGATC GAGAACTTCC TCGACATGGC GCACTTCCCC
TTCGTGCATG CCGGCTTCCT GGGCCAGGTG CCGCACACCG AAGTGGCCAA GTACCAGGTG
CAGGTCGATC CCGCCACGCA CGAGATCTGG GCCACCGACT GCCGCTTCTG GCAGCCCCGC
GCCTCGGCCG CCCACGGCAG CGGCAGCGAA GTGCTCTACA AGTACCGGGT GATGCAGCCG
CTCTCGGCCA TGCTCTACAA GTCGAGCTCG CGCGACGGCG AGCTCGATGC CATCGGCCTG
TTCCTGCAGC CGCTGGACGA CGAGCACGTG ATCGCCCATA CGCTCTTGGC CTGCTACGAC
GACAGCTCCA CCGATGCCGA GCTCATCGCG TTCCAGCAGA CGATCTTCGG GCAGGACAAG
CCGATCCTGG AGAACCACGC CTTCAAGCGC ATGCCGCTCG AAGGCCGCGC CGAAACGCCG
ACGCGAGGCG ACACCTCCTC CGTCACCTAC CGGCGCTGGC TGCGCGAGCG CGGCATGCGC
TTTGGCGTGA GGCAGGCGGC ATGA
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| Protein sequence | MPFVTDDPNM LDDWLVAGPA AALAGSSEAR PRAVRLLGET LQLWTDDADM PQCRLGTRAL
SVQARHGHLW VCPSGRPARP LFDFPEYGEA GRRIIDCGAI GVAVSGLRVI ENFLDMAHFP
FVHAGFLGQV PHTEVAKYQV QVDPATHEIW ATDCRFWQPR ASAAHGSGSE VLYKYRVMQP
LSAMLYKSSS RDGELDAIGL FLQPLDDEHV IAHTLLACYD DSSTDAELIA FQQTIFGQDK
PILENHAFKR MPLEGRAETP TRGDTSSVTY RRWLRERGMR FGVRQAA
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