| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1695 |
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| Symbol | |
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| ID | 7974763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1827064 |
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| End bp | 1828038 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792294 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002943611 |
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| Protein GI | 239814701 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.674415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA ATGCCTCGCC CGCGGTCCAC ACCTGGTCCA CCGACGCCGT GCCGCCGGCG
CAGCGGCTGG ACTACTGGAT CGGCGCGGTG TGCGAAGGCT TTCTCGAAAT GGACGTGACC
AGCTCCCTGG CCGGCAGCTT TGGCGCCACG CTCGAATCCG CACCGCTGGG CGCCATCGGC
GTGAACCGGG TCCGCGGCAG CGCGCAGGAC GTGTACCGCA GGCGCCGGGC CATTGCCCAG
AGCCGCAGCA ACTACTACTA CCTGCTGTGC AAGACCGATT CGCCCTGGGT CGCCGTGCAG
GACGGCCGCT CGGCGCGCAT GCTGCCGGGC GATCTGGTGC TGGTCGATTC GCGGCGCTGC
TATGAACTTC GCCTGCTCCA GTCCGCCGAT ACGCTGTCGC TCGAACTGCC GACCGCGTGG
GTCGAGTCGT GGCTCCCCGA TGCCGGCGGG CAGGTGGCGC GGCGCATCGA CGGGCAGTCC
GGCTGGGGCC GTGTGCTGAG CGGCTTTGCC CAGCAGCTTT CTCCGCAGGG CGCTTTGAAG
CCGCCGCTGC CCGCGGCCTT GCTGACCGAT CACCTTGGCG GGTTGCTCGC ACTTGCCGCC
GGCACGGCAT GCGATGCGGG CGGGTCGGCC GCGCCCAGCG AAAGCGCCCG TGCCGCGCTG
CGCCGCCGCG TGCTCGACGC CACGCGCGAA CGCCATGCCG AGCCGGGCCT GACGGCTGCC
GGCGTGGCGC GCGGACTGGG CATCTCGGAG CGCAGCCTGC ACCGCTGCCT GTGCGAAGGG
TCGACCACCT TCGCCGCCGC GCTGACCGGC TTTCGCATGC AGGTGGCGCG GCGGATGCTC
GGCGATGCGC GCTTCGATCG CCTGAGCATT GCGGAAATCG GCTTGCGCGT CGGGCTCGCC
GATGCGTCCC ACTTCGTTCG CCAATTCAGC CGGCATCTCG GCATGACGCC GGGTGCCTGG
CGGCGCCAGC GCTGA
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| Protein sequence | MNANASPAVH TWSTDAVPPA QRLDYWIGAV CEGFLEMDVT SSLAGSFGAT LESAPLGAIG
VNRVRGSAQD VYRRRRAIAQ SRSNYYYLLC KTDSPWVAVQ DGRSARMLPG DLVLVDSRRC
YELRLLQSAD TLSLELPTAW VESWLPDAGG QVARRIDGQS GWGRVLSGFA QQLSPQGALK
PPLPAALLTD HLGGLLALAA GTACDAGGSA APSESARAAL RRRVLDATRE RHAEPGLTAA
GVARGLGISE RSLHRCLCEG STTFAAALTG FRMQVARRML GDARFDRLSI AEIGLRVGLA
DASHFVRQFS RHLGMTPGAW RRQR
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