| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1693 |
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| Symbol | |
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| ID | 7974761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1824185 |
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| End bp | 1825279 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792292 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002943609 |
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| Protein GI | 239814699 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.637102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCCG CCCGGATTCC CATCCATGCC ATCAAGGGCC GCGGCGCGGC CACGCACCTG
GCGCACCGCT TTTCGCGCGA CGAGCGCAAT GCCTTCGACG ACGGCTGGGG CACGCTCGAA
GAAGGCGCGG CCGAAGCCGA AGAACTGCCG CGGCTTGCCA CCGAAGTGCG CTTCGAGGAC
GTGAAGTCGG TGCTCAACGA AAACGACTCG CCCGATATTT CGTTCGACCG CTCGCTCAAC
CCGTACCGCG GCTGCGAGCA CGGCTGCATC TACTGCTTTG CGCGGCCCAC GCACAGCTAC
CTCAACCTCT CGCCGGGGCT CGACTTCGAG ACCAGGCTCA TCGCCAAGCG CAACATCGTC
GAGGTGCTGC GTGCCGAACT CGGCCGCAGG AGCTACCGGC CCAGCCACAT CGCGATCGGC
ACCGCCACCG ATTGCTACCA GCCCATCGAA CGCGAACTGC GGCTCACCCG TTCGGTGATC
GAGCTGCTGA AGGAAACGCG GCATCCGTTT GCGCTGGTCA CGAAATCGAG CGCGGTGGAG
CGCGACCTCG ACCTGATCGC GCCCATGGCC GCCGAGCACC TGGCCGCGGT GTACATCACC
GTGACCACGC TCGACGGCGA GCTGGCCCGC AAGCTGGAGC CGCGCGCCGC CGCGCCGCAC
CGGCGGCTGC GCACCATACG CACCCTGGCC GAGGCGGGCG TGCCGGTGGG TGTGAGCGTG
GCGCCGCAGA TTCCCTTCGT CAACGAAGAC ATGGAACAGG TGCTCGAAGC CGCCTGGGCC
GCCGGTGCGC GCAACGCCTT CTACACGGTG ATCCGGCTGC CCTGGGAGGT GGCGCCGCTC
TTCAAGCAAT GGCTCGAGCT GCACTACCCG CAGCGCGCGG ACCGCATCAT GGCGCGCATC
CACGAGATGC GCGGCGGCAA GGACTACGAC GCCGACTTCG CCACGCGCAT GAAGGGCTCC
GGCCTCTGGG CCGACCTGAT CCGCCAGCGC TTCGAGAAGG CGGCGAACCG CATCGGCTTC
AACCGCGAGC GCATTGCGCT CGACCTCGGC GCGTTCCGGC CGCCTGGCGC GGCGGGGCAG
GGCAGCCTGT TCTAG
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| Protein sequence | MPAARIPIHA IKGRGAATHL AHRFSRDERN AFDDGWGTLE EGAAEAEELP RLATEVRFED
VKSVLNENDS PDISFDRSLN PYRGCEHGCI YCFARPTHSY LNLSPGLDFE TRLIAKRNIV
EVLRAELGRR SYRPSHIAIG TATDCYQPIE RELRLTRSVI ELLKETRHPF ALVTKSSAVE
RDLDLIAPMA AEHLAAVYIT VTTLDGELAR KLEPRAAAPH RRLRTIRTLA EAGVPVGVSV
APQIPFVNED MEQVLEAAWA AGARNAFYTV IRLPWEVAPL FKQWLELHYP QRADRIMARI
HEMRGGKDYD ADFATRMKGS GLWADLIRQR FEKAANRIGF NRERIALDLG AFRPPGAAGQ
GSLF
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