Gene Vapar_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1692 
Symbol 
ID7974760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1823461 
End bp1824066 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID644792291 
Producttranscriptional regulator-like protein 
Protein accessionYP_002943608 
Protein GI239814698 
COG category[K] Transcription 
COG ID[COG1510] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.312717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA CCGACATCCA ACGCAAGTTC GTTCTCCACT GGGGAGAAAT GGGCTCCATG 
TGGGGCGTCA ACCGCACGGT CTCTCAGATC CACGCGCTGC TGTTCGCGCA CGGCAAGCCC 
ATGCATGCAG AAGAGCTCTC CGACACGCTG GGCGTGGCCC GCTCCAACGT GAGCAACAGC 
CTGAAGGAAC TGCAGGCCTG GAACCTCGTG CGCGTGACGC ACATCCTGGG CGACCGGCGC 
GACTATTTCG AAACCAGCGT CGACGTCTGG GAACTGTTCC GCACCGTGGT GCGCGAGCGC 
AAGGAGCGCG AGTTCGACCC GACCATCCGC GTGCTGCGCG AGATCGTCTC CAGCCCCGAC 
TTCCAGAAGG AGCCCGCCGA TGCGCAGGAC CGCATCCGCT CCACCATGGA CCTCATGAGC 
AAGCTCGCCA CCTGGGCCGA CGAGATGCTG CGGCTCTCGC CCGGCACGCT CGACAAGGTG 
CTGACGCTCG GGGCCAGCGT GCAGAAATTC GTTCGCGGCG ATGCGGCGCC GGCGGCCACG 
CCCGCGGCTC CCAAGAAGGA TGGCGACGAC CCCGATGCCC ACCACGCCAG CCTGCCGATG 
ATCTGA
 
Protein sequence
MELTDIQRKF VLHWGEMGSM WGVNRTVSQI HALLFAHGKP MHAEELSDTL GVARSNVSNS 
LKELQAWNLV RVTHILGDRR DYFETSVDVW ELFRTVVRER KEREFDPTIR VLREIVSSPD 
FQKEPADAQD RIRSTMDLMS KLATWADEML RLSPGTLDKV LTLGASVQKF VRGDAAPAAT 
PAAPKKDGDD PDAHHASLPM I