| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1687 |
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| Symbol | |
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| ID | 7974755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1819204 |
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| End bp | 1820553 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792286 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002943603 |
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| Protein GI | 239814693 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGCG AAGAGAAGAA CCGCCTGCTG ACCGAGGTCG GGCCGGGCAA GCCGATGGGC
GACTACCTGC GCCGCTACTG GCATCCGGTT GCCGGAGCCA GCGAGTTCGA CGACAAGGCC
GTCAAGCCGC TGCGCATCCT GGGCGAGGAC CTGGTGCTCT ACAAGGACCT GGGCGGCAAC
TACGGGCTCG TGGACCGCCG CTGCCCGCAT CGCAATGCCG ACATGTCCTA CGGCTTTGTC
GAGCAATGCG GCTTGCGCTG CAGCTACCAC GGCTGGCAGT ACGACCAGAG CGGCCAGTGC
GTGCACCAGC CCTTCGAGGA AACGCTGGAC CCGGACGCGC GCATGCGCAG GAACACGAAG
ATCAAGGCCT ACCCGGTGCA GGAAAAGGCC GGGCTGCTCT GGGCCTACAT GGGGCCGCAG
CCCGCACCGC TGCTGCCCGA CTGGGAGCTG TTCAACTTCA GGAATGGTTT CGCGCAGGCC
GTGTTCGCAG AGATACCCTG CAACTGGTTC CAGTGCCAGG AAAATTCCAT CGACCCCGTG
CATTTCGAAT GGACGCACAA CAACTGGACC ACGCGCCTGC AGGGCGACGA AGGCCCCTAT
GTGCCAACCC ACCTGAAGCT CGCGTTCGAT GAGTTCGAGC ACGGCTTCGT CTACCGGCGG
TTGCGCGGCG GCGAGAGCGA GGACAACGTG ATGTGGACCA CGGGCCGCGT CACGCTGTGG
CCCAACGGCT TCTTCCTTGG CCACCACTTC GAATGGCGCG TGCCCATCGA CGACCACAAC
ACCCTGAGCG TGCTGTGGGT GCTGAGCCGC GTGCCGACCG AGCAGGAGCC CTACGTGCAG
GAGCGCATTC CGTCCTGGTA CGGCCCGATC AAGGATCCGG CCACCGGCCG CTGGATCACG
AGCCACGTGG CCAACCAGGA CTTCGTGGTG TGGGTGGGGC AGGGCACGGT CACCGACCGC
ACCCGCGAAA AGCTCGGCCA GAGCGACAAG GGCATCGTGA TGATGCGCCG CCGCTTCTTC
GAGGAACTGG AGGCGATGCA GGCCGATCCG GCGCACGAGC CCAAGGGCGT GATCCGCGAC
ACTGCGATGA ACCGCAATGT GCCGCTGCCT TCGGCCTGCC GCGACGAGAT GCTCCATGGC
CTGCCGCGCG CGGAGCTTGC CGCCCATCCG CTGCTGGGGC CCTACCTGAA GGACTTCTTC
GGGCAGGCCG GGCAGCCCGA GCACGTGCGC GCGGCCTACG AACGCGCGAT CGGCCAGAAG
GTGGAGGGCG CGAAATTCTT CAAGGTGCAC GGCAGCGCGG CGGAGCACCA CACGCTGCAA
CCCACGAGCG AAGAAGAACA GGCGGGCTAA
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| Protein sequence | MLSEEKNRLL TEVGPGKPMG DYLRRYWHPV AGASEFDDKA VKPLRILGED LVLYKDLGGN
YGLVDRRCPH RNADMSYGFV EQCGLRCSYH GWQYDQSGQC VHQPFEETLD PDARMRRNTK
IKAYPVQEKA GLLWAYMGPQ PAPLLPDWEL FNFRNGFAQA VFAEIPCNWF QCQENSIDPV
HFEWTHNNWT TRLQGDEGPY VPTHLKLAFD EFEHGFVYRR LRGGESEDNV MWTTGRVTLW
PNGFFLGHHF EWRVPIDDHN TLSVLWVLSR VPTEQEPYVQ ERIPSWYGPI KDPATGRWIT
SHVANQDFVV WVGQGTVTDR TREKLGQSDK GIVMMRRRFF EELEAMQADP AHEPKGVIRD
TAMNRNVPLP SACRDEMLHG LPRAELAAHP LLGPYLKDFF GQAGQPEHVR AAYERAIGQK
VEGAKFFKVH GSAAEHHTLQ PTSEEEQAG
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