| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1686 |
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| Symbol | |
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| ID | 7974754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1818186 |
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| End bp | 1819181 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792285 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943602 |
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| Protein GI | 239814692 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.893749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCA CCCGTCGCGA AGCGGCCCGT GCCGCCGCCG CCATCGCCGC ATCGGGCCTT
GCCCTGCTGG CCGCCGGCGG CGCCATGGCG CAGGCCTGGC CGGGCAGGCC GATCACCATC
GTCGTTTCCT ATCCCGCGGG CGGCGACACC GATGCGGTCG CGCGCATCTA TGCCGAGAAA
CTCTCGCTGC GCATCGGGCA GCCGGTGCTC GTGGACAACC GGCCCGGTGC CAGCGGCATG
ATCGGCAACG CCTGGGTCGC CAAGGCCGCA CCGGACGGCT ACACGCTGCT GTTCACCCCC
AGCACTTTTC CGATCGCGCA GCATGTGCTG AAGGCCGGCC CCGGCGTGGC GCACGACGTG
GTCAAGGATT TCACGCCCAT CGTGAAGACC GGCAACATCC CGCTGCTGCT GGTGACCGCG
CCGTCCACCG GCATCAAGAA CGTGGCGCAG CTGGTGGCCG ACGCCCGGGC CGGCAAGGCG
CTGAGCTACG GCACGCCGGG CGCGGGCTCG CCGATGCACA TCGCGGGCGA GCTCTTCAAC
AAGGACGCCG GAACGCAGAT TGCCCACGCG CCCTATCGCG GCGTGGCGCC GGTGGTGAAC
GATGCGCTCG GCGGACACGT GGGCGTGGGC TGGATCACCC CCGGCGCGGT GGCGGGCCAC
ATCGCCGGCG GCAAGCTCGT TGCGCTGGCG GTGGCCGAGC GCCAGCGCAC CAAGCTGATG
CCCGCCGTGC CCACGCTGAT CGAGCTTGGC TACAAGGACG TGGATGTCAG CGCCTGGATG
GGCCTGCTGG GCCCCAAGGG CATGCCGGTG GAGCTGGTGC AGGCCCTGAA CCGCCACTTC
AACGAAGTGC TGAAGATGCC CGACGTGCAG GCCCGCATGG CTGCGCTCGG CATCGAGCCG
ATCGGCGGCG CGCCCTCGGT GCTGGCGCAG CAGATCGCGG ACGACGACCA GCGCTTCGGC
AAGCTGGTGA AGGAATTCGG CATCCGCGCC GAATGA
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| Protein sequence | MKFTRREAAR AAAAIAASGL ALLAAGGAMA QAWPGRPITI VVSYPAGGDT DAVARIYAEK
LSLRIGQPVL VDNRPGASGM IGNAWVAKAA PDGYTLLFTP STFPIAQHVL KAGPGVAHDV
VKDFTPIVKT GNIPLLLVTA PSTGIKNVAQ LVADARAGKA LSYGTPGAGS PMHIAGELFN
KDAGTQIAHA PYRGVAPVVN DALGGHVGVG WITPGAVAGH IAGGKLVALA VAERQRTKLM
PAVPTLIELG YKDVDVSAWM GLLGPKGMPV ELVQALNRHF NEVLKMPDVQ ARMAALGIEP
IGGAPSVLAQ QIADDDQRFG KLVKEFGIRA E
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