| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1680 |
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| Symbol | |
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| ID | 7974748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1812106 |
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| End bp | 1813098 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792279 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943596 |
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| Protein GI | 239814686 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.140341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACG CCATGAACAA CCCCCGCCGC CTTCTTCTTG CCGCCACCCT CTGCTCGATG
CTGCCGATGG CGGCACTCGC GCAGGGCGCC TGGCCCACGG CCAAGCCGAT CACGCTGATC
GTTCCCTACA CCGCGGGCGG CAGCGTGGAC GTCAACGCGC GCCTCGTCGC CACGCGGCTG
GGCGAGCGGC TGAAGCAGTC GGTGGTGATC GAGAACGTGA GCGGCGCGGG CGGCGCCATC
GGCGTGGCCA AGGCCGTGAA CGCGGCGCCC GACGGCTACA CGCTGGTGGT CGGGCCCGAC
AGCGCCATCG CCATCGGGCG GCTGGTCAAC CCCTCGGCCT TCAAGTTCGA TCCGCTCAAG
GACCTGGCGC CGGTCGGGAT GCTCAACACT GCGCCCATGG TGCTGGTGGC GCGGCCCGGC
CTGGACGCCA ACACCTATGC CGACTTCGTC AAGCTCGCCA AGGCCAAGCC CGGCGCCTAC
AACTACGCCA CCTCGGGCGT GGGCACGGTG CTGCAGCTGG CGATGGAACT GCTCAAGCAG
CGCAGCGGCA TCTTCGTGAC CCATGTGCCC TACCGCGGCG GCGCCCAGAT TGCCACCGAC
GTGATCGGCA ACCAGGTCGA CCTGGCGATG CTGGTCAGCA CCAGCGCCAT TCCGCATGTG
GGCGGCGGCC GCCTGAAGGC GCTCGGCATC ACCGGCAGCC AGCGCCTTGC CGCGCTGCCC
AATGTGCCCA CCTTCAACGA GATGCCGGGC CTCAAGGGCT ACGACATGGT GAGCTGGACC
GGCATCTTCG CCCCCGCCCG CACCCCGCCG GCCGTCGTGG CCCGCCTCAA CCAGGAATTG
AATGCCGTGC TCGCCGAGGA GCAGGTGCGG GCCAAGCTCA ACGAACAGGG CGCCCTGCCC
GGCAGCGGCA CGCCCGAGCA GTTCGGCCAG TTCGTCCAGG CCGAATACGC CCGCAACCAG
AAGATCGTGC AGTCGGCCAA TATCAAGGAA TAA
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| Protein sequence | MNHAMNNPRR LLLAATLCSM LPMAALAQGA WPTAKPITLI VPYTAGGSVD VNARLVATRL
GERLKQSVVI ENVSGAGGAI GVAKAVNAAP DGYTLVVGPD SAIAIGRLVN PSAFKFDPLK
DLAPVGMLNT APMVLVARPG LDANTYADFV KLAKAKPGAY NYATSGVGTV LQLAMELLKQ
RSGIFVTHVP YRGGAQIATD VIGNQVDLAM LVSTSAIPHV GGGRLKALGI TGSQRLAALP
NVPTFNEMPG LKGYDMVSWT GIFAPARTPP AVVARLNQEL NAVLAEEQVR AKLNEQGALP
GSGTPEQFGQ FVQAEYARNQ KIVQSANIKE
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