| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1679 |
|---|
| Symbol | |
|---|
| ID | 7974747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 1811636 |
|---|
| End bp | 1812076 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644792278 |
|---|
| Product | CBS domain containing protein |
|---|
| Protein accession | YP_002943595 |
|---|
| Protein GI | 239814685 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0517] FOG: CBS domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0248088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA GCGACATCCT TCGCGTCAAG GGCAACACGC TCTTCACCAT CACGCCTGAC
GACCTGCTGG CCGAAGCCGT CAAGACCATG GCGGAAAAGG ACATTGGCTC CCTGGTGGTC
ATGGAACACG GCGACCTGGT CGGCATGCTC ACCTTCAGGG AAGTGATCCT GGCCATTGTC
GACAACGGCG GCCAGGTGGG CGGCACGCTG GTGCGCAAGG CCATGGACGA TGCGCCCGTG
ACCTGCACGC TCGAAACCGA CCTCGACGAA ATCCGCCGCA TCATGCTGGA GCGCCACGCG
CGCTACATGC CCGTGATGGA CAAGCGCATG CTGATGGGCG TGATCAGCTT CTACGACGTG
GCCAAGGCGG TGGTGGACAG CCAGAACTTC GAGAACAAGA TGCTCAAGGC CTACATCCGC
GACTGGCCCG AAGAGCAGTA G
|
|---|
| Protein sequence | MKVSDILRVK GNTLFTITPD DLLAEAVKTM AEKDIGSLVV MEHGDLVGML TFREVILAIV
DNGGQVGGTL VRKAMDDAPV TCTLETDLDE IRRIMLERHA RYMPVMDKRM LMGVISFYDV
AKAVVDSQNF ENKMLKAYIR DWPEEQ
|
|---|
| |