| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1677 |
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| Symbol | |
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| ID | 7974745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1809030 |
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| End bp | 1809842 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792276 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002943593 |
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| Protein GI | 239814683 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.216999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACA CCGTCAACAG CCACGCCACC TACTGCTACA CCGGCGGCAA GGCTTTCGAT
GCGAACAAGC CGACCGTGGT GTTCATCCAC GGCGTGCTCA ACGACCACAG CGTGTGGATC
CTGCAAAGCC GCTGGTTCGC CAACCACGGC TGGAACGTGC TGGCCGTCGA CCTGCCCGGC
CACTGCAAGA GCGAAGGCCC GCCGCCCGCC AGCGTGGAAG ACGCGGCGCA GTTCGTGCTC
GCGCTGCTCG ACGCGGCCGG CGTGCAGAAG GCCGCACTCG TGGGCCACAG CTTCGGCTCG
CTGATCGCGC TCGAGGCCGC CTCGCGCGCG CCCGAACGGG TGACCCATCT GGCTATGGTG
GGCACGGCCT ACCCGATGGC CGTGTCGCCC GCGCTGCTCG ACGGCGCGCT CAACGATCCG
CAGCGCGCCA TCGCAATGGT CAACACCTTC TCGCATTCGC TGCTCGCGCC GCCGCCCTCC
TCGCTCGGCC CCGGCACCTG GCTGTACGGC AGCTCGCGCG CGCTGATGCG GCGCGTGCTC
GCGAGCAACC GCGACGCCAA CGTGTTCCAC ATCGGCTTCA AGGCCTGCAA CGACTACGCG
AACGGCGAAA AGGCGATCGA AGGGGTGCAG TGCCCCGTGC TGTTCCTGCT CGGCGACGCC
GACCAGATGA CGCCGCCGCG CGCCACCAAG GCGCTGGTGG GGAAGGCCCG CAACGCCAAG
GTGGTGACCG TGCACGCCGG CCACGCACTG ATGAGCGAGG CGCCCGACGA AGTGCTGTTC
GCGCTGCGCG ACTTCGTCGG CGCGCCCGCC TGA
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| Protein sequence | MNYTVNSHAT YCYTGGKAFD ANKPTVVFIH GVLNDHSVWI LQSRWFANHG WNVLAVDLPG
HCKSEGPPPA SVEDAAQFVL ALLDAAGVQK AALVGHSFGS LIALEAASRA PERVTHLAMV
GTAYPMAVSP ALLDGALNDP QRAIAMVNTF SHSLLAPPPS SLGPGTWLYG SSRALMRRVL
ASNRDANVFH IGFKACNDYA NGEKAIEGVQ CPVLFLLGDA DQMTPPRATK ALVGKARNAK
VVTVHAGHAL MSEAPDEVLF ALRDFVGAPA
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