| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1676 |
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| Symbol | |
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| ID | 7974744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1808036 |
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| End bp | 1809019 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792275 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943592 |
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| Protein GI | 239814682 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.372386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTG CTCTCTTCCA TCGGCTTCGT GGCCTGCTGG CCTGCACCTT GGCGCTCGTG
GCCTTCCATG CGCCCGCGCA GGAAAAATGG CCCGACAGGC CCGTGAAGCT GGTCGTGCCC
TTTCCCCCGG GCGGCGGCAC CGACATCGTC GCGCGGGCGA TGGGGCAGGG CCTGTCGGAG
CGGCTCGGCC AGCCCGTGGT CATCGACAAC AAGCCAGGCG CCGCCACCAT CATCGGCACC
GATGCGGTGG CCAAGGCCGC GCCCGACGGC TACACGCTGC TGCTCTCGGG CTCCACCAGC
TACAGCGTGA ACCCCGCGCT GCGCGCCAGG CTGCCCTACG ACCCGGTGCG CGACCTCGCG
CCCATTGCCA TCGTCGCGCG CACGCCGCTG GTGCTGGTGG TGGGGGCCGG CACGCCATGG
CGCTCGCTGC CCGAGCTCAT CGCCGCCGCC AAGGCCAAGC CGAAGAGCAT CCGCTACGCC
ACCTTCGGCG CCGGCTCGGG CCCGCACCTC GCGGGCGAGC TGCTTGCGCT GGCCGCGGGC
ATCCAGCTGC AGGACATCCC GTACAAGGGC AGCAGCCAGG GTTCGATGGC GGTGATCGGC
GGCGAGATCG AGGTCGGCAT CGACACCGTG GCGGCCGTGG CGCCGCATGT GCGCTCGGGC
AAGCTGCGCG CCCTGGGCAT CGTGGGGGCG GCGCGCTCGA GCATGCTGCC GGAGGTGCGC
ACGCTGGCCG AGCAGGGCCT GCCCGATGCC ACCTTCGACG CCTGGTACGG CTTTGCCGCG
CCGGCGCGCA CGCCGCCACC GGTGCTCGAC AAGCTGGCGC GCGCCGTCAC GGCCACGATG
GGCAGCGCGG CCCTGCAGGC GCAGCTGCGC GCGCAGGGCA TGGAGCCCGT CGTCATCGGC
GCGCCGGCGT TCCGCAGCCA GATGGAGGGC GAGATTTCCC GCTACCGCGC GCTGGCGCAC
CGCGCGGGCA TCGCGGCGGA ATAG
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| Protein sequence | MKTALFHRLR GLLACTLALV AFHAPAQEKW PDRPVKLVVP FPPGGGTDIV ARAMGQGLSE
RLGQPVVIDN KPGAATIIGT DAVAKAAPDG YTLLLSGSTS YSVNPALRAR LPYDPVRDLA
PIAIVARTPL VLVVGAGTPW RSLPELIAAA KAKPKSIRYA TFGAGSGPHL AGELLALAAG
IQLQDIPYKG SSQGSMAVIG GEIEVGIDTV AAVAPHVRSG KLRALGIVGA ARSSMLPEVR
TLAEQGLPDA TFDAWYGFAA PARTPPPVLD KLARAVTATM GSAALQAQLR AQGMEPVVIG
APAFRSQMEG EISRYRALAH RAGIAAE
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