Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1663 |
Symbol | |
ID | 7974731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1797669 |
End bp | 1798202 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792262 |
Product | Dihydrofolate reductase |
Protein accession | YP_002943579 |
Protein GI | 239814669 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAGC TCGCCACGAC ACCGCGCATC CACCTGATCT TCGCGCGCGC CGCCAACGGC GTGATCGGCG CCAAGGGCAC CATTCCCTGG CACCTGCCCG AAGACATGGT TCACTTCAAG CAGCAGACGG CCGGCGCCCC GGTCGTCATG GGCCGCAAGA CCTGGGATTC GCTGCCGCCG CGCTTCCGGC CGCTGCCGGG CCGCCGCAAC ATCGTCGTGA CGCGGCAGGA CGACTGGAAG GCCGAAGGCG CATGGCGCGT GGGCAGCCTG CAGGAAGCGC TCGCGCTGTG CGAGGAATCG CAGGTGCCCG ACGTGTGGAT CATCGGCGGC GCGCAGATCT ACGCCGAGGC CGAGCCGCTC GCGCAGCAGG TGGTCGTGAC CGAGCTCGCG CACGACTACG AAGGCGATGC GCATGCGCCG GAGCTCTCCC CCTCCGCCTG GCGCGAAACC AAGCGCGAAG CGCATGTCTC GGCGAAGGAG GGCCTCAACT ACAGCTTCGT GACCTACGAA CGCATCGCGC CATCGAAGGC ATGA
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Protein sequence | MSELATTPRI HLIFARAANG VIGAKGTIPW HLPEDMVHFK QQTAGAPVVM GRKTWDSLPP RFRPLPGRRN IVVTRQDDWK AEGAWRVGSL QEALALCEES QVPDVWIIGG AQIYAEAEPL AQQVVVTELA HDYEGDAHAP ELSPSAWRET KREAHVSAKE GLNYSFVTYE RIAPSKA
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