Gene Vapar_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1663 
Symbol 
ID7974731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1797669 
End bp1798202 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID644792262 
ProductDihydrofolate reductase 
Protein accessionYP_002943579 
Protein GI239814669 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGC TCGCCACGAC ACCGCGCATC CACCTGATCT TCGCGCGCGC CGCCAACGGC 
GTGATCGGCG CCAAGGGCAC CATTCCCTGG CACCTGCCCG AAGACATGGT TCACTTCAAG
CAGCAGACGG CCGGCGCCCC GGTCGTCATG GGCCGCAAGA CCTGGGATTC GCTGCCGCCG
CGCTTCCGGC CGCTGCCGGG CCGCCGCAAC ATCGTCGTGA CGCGGCAGGA CGACTGGAAG
GCCGAAGGCG CATGGCGCGT GGGCAGCCTG CAGGAAGCGC TCGCGCTGTG CGAGGAATCG
CAGGTGCCCG ACGTGTGGAT CATCGGCGGC GCGCAGATCT ACGCCGAGGC CGAGCCGCTC
GCGCAGCAGG TGGTCGTGAC CGAGCTCGCG CACGACTACG AAGGCGATGC GCATGCGCCG
GAGCTCTCCC CCTCCGCCTG GCGCGAAACC AAGCGCGAAG CGCATGTCTC GGCGAAGGAG
GGCCTCAACT ACAGCTTCGT GACCTACGAA CGCATCGCGC CATCGAAGGC ATGA
 
Protein sequence
MSELATTPRI HLIFARAANG VIGAKGTIPW HLPEDMVHFK QQTAGAPVVM GRKTWDSLPP 
RFRPLPGRRN IVVTRQDDWK AEGAWRVGSL QEALALCEES QVPDVWIIGG AQIYAEAEPL
AQQVVVTELA HDYEGDAHAP ELSPSAWRET KREAHVSAKE GLNYSFVTYE RIAPSKA