| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1657 |
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| Symbol | |
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| ID | 7974725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1789581 |
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| End bp | 1791086 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792256 |
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| Product | putative circadian clock protein, KaiC |
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| Protein accession | YP_002943573 |
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| Protein GI | 239814663 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG ACGGTACGGC CGTGCCGTCC GCCCAGGACG GCCTGATCAA AGTCGGTGTT
CCCGGCCTCG ACGATGTTCT TGGCGGCGGG CTCACGTCCA ACCGCCTCTA CCTGGTCGAG
GGCACGCCCG GTGCCGGCAA GACCACCATC GCGCTTCAGT TCCTGATCGA AGGCGTGAAG
CGCGGCGAGT CGGTGCTGTA TGTCACCTTG TCGGAAACTG CGCAGGAACT CAAGGGCGTG
GCGCGCTCCC ATGGCTGGGA CCTGAGCGGC ATCGAGGTGC GCGAGATGCT TCCGTCGGAG
ACCGCGCTCG AGCCCGACGA GCAGTACACG ATGTTCCACC CGTCCGAGGT CGAGCTCAGC
GAGACGACCC TTCGCATCCT CTCGGACGTC GATGTGCTCA AGCCTTCGCG CGTGGTGTTC
GACTCGCTGT CCGAACTGCG CCTGCTGGCC GGCAGCTCGC TGCGCTACCG GCGGCAGATC
CTCGCGCTCA AGCAGTTCTT CGCGGGCCGC CAGTGCACGG TGCTGCTGCT GGACGACATG
ACCGCCATGA AGCACGACCT GCAGGTGCAG AGCATTGCCC ATGCGGTGAT CCGGCTCGAG
CAGATCAGCT CCGACTACGG CGCCGCGCGG CGCCGGCTGG TGGTCAGCAA GTATCGGGGC
CAGCAGTTCC GCGGCGGCTA CCACGACTAC CGCATCGAGC GCGGCGGCCT GCGCGTCTTT
CCGCGCCTGG TCGCTTCCGA GCATCCCTCG GCGCCGGCGG TGGCGCCGGC GCGCATTCCC
AGCGGCCTGG AAGCGCTCGA TGCGCTGCTG GGCGGCGGCC TGGAGCGCGG CACCAGCACG
CTGTTCGTCG GCGCGCCGGG CACGGGAAAG TCGACGGTGG CCGTGCAGTT TGCGCTGGCG
GCGGCGCAGC GCGGCGAATG CGCGGCCCTC TTCATCTTCG ACGAGAGCAT CCACACGCTG
CGCACGCGCT GTGAAAGCAT GGGCATGGAC CTCGGGCCAT ACATCGAATC CGGCCGCATC
AAGGTGCGGC AGGTCGACCC CGCCGAGCTG TCGCCGGGCG AGTTCGTGCA CCTGATCCGG
CTGGCGGTGG TGGAGTGCGG TGCGGCGGTG GTGGTGATCG ACAGCCTCAA CGGCTACCTC
AACGCGATGC CCGACGAGCG CTTCCTGATC GTGCAGCTGC ACGAGCTGCT TTCCTACCTG
GGCCAGGCCG GCGTCGCCAC GCTGCTGGTG GGCGCGCAGC ATGGCCTCAT CGGCATGCAG
ATGAAGACGC CGGTGGATGC GAGCTACCTG GCGGACGCGG TGGTGCTGCT GCGCTACTTC
GAGCTGGAGG GCGAGGTGCG CCAGGCGATC TCGGTGCTGA AGAAGCGCGG CGGCGCGCAC
GAGCGCAGCA TCCGCGATTT CTCGATGACC GCCACGGGCC TCAAGGTGGG CGAGCCGCTG
CGTCATTTCA GGGGCATCCT GACGGGCATC CCCATTCCCA CCGACGGCGC GCAGCACGCA
TCGTGA
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| Protein sequence | MKLDGTAVPS AQDGLIKVGV PGLDDVLGGG LTSNRLYLVE GTPGAGKTTI ALQFLIEGVK
RGESVLYVTL SETAQELKGV ARSHGWDLSG IEVREMLPSE TALEPDEQYT MFHPSEVELS
ETTLRILSDV DVLKPSRVVF DSLSELRLLA GSSLRYRRQI LALKQFFAGR QCTVLLLDDM
TAMKHDLQVQ SIAHAVIRLE QISSDYGAAR RRLVVSKYRG QQFRGGYHDY RIERGGLRVF
PRLVASEHPS APAVAPARIP SGLEALDALL GGGLERGTST LFVGAPGTGK STVAVQFALA
AAQRGECAAL FIFDESIHTL RTRCESMGMD LGPYIESGRI KVRQVDPAEL SPGEFVHLIR
LAVVECGAAV VVIDSLNGYL NAMPDERFLI VQLHELLSYL GQAGVATLLV GAQHGLIGMQ
MKTPVDASYL ADAVVLLRYF ELEGEVRQAI SVLKKRGGAH ERSIRDFSMT ATGLKVGEPL
RHFRGILTGI PIPTDGAQHA S
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