| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1655 |
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| Symbol | |
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| ID | 7974723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1788191 |
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| End bp | 1789147 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792254 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_002943571 |
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| Protein GI | 239814661 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCCG AATCGAAGCT TGCGATCTAC GGCGCCATCG CGGCCAATGT GGCCATTGCC
GCCACCAAGT TCACCGTGGC CGGCATCACC GGCAGTTCGG CCATGCTGTC CGAAGGCATC
CATTCGGCGG TCGACACCTT CAACGGCGTC CTGCTGCTGG TGGGCATCCG GCTGAGCCAG
CGGCCCGCGA CCGCCGAGCA TCCCTTCGGC CACGGCAAGG AGCTGTACTT CTGGAGCCTG
ATCGTCGCCG TGCTGATCTT CGGGCTGGGC GGCGGCGTGT CGTTCTACGA GGGCATCCAG
CACATCCGCA AACCGGAGCC GATGCGCGAT CCGGGCTGGA ACTACGTGGT GCTGGGCCTG
GCCGCATTGT TCGAAGGCGC GAGCTTCCTG GTTGCGCTGC GGCAGTTCCG CGTGCAGTCG
CGCGGTGCGC CGTTCTGGCG CGCGCTCGGG CAGAGCAAGG ACCCGACCAC CTACACCGTG
CTGGCCGAAG ATTCGGCGGC GCTGGCCGGG CTGGCGGTGG CGGCCTTGGG CATCTACTTC
AGCCACCGGC TCGGCATGCC GGCGCTGGAC GGCGCGGCCT CGGTGGTGAT CGGGCTGCTG
CTGGCCGGCG TGGCGGTGCT GCTGATCAGC CAGGCCCGCG GGCTGCTGAT CGGCGAGGGC
ATCCGCCCCG AGACCGCGCG CGCCATCCGC GCCCTGGCCA TGGAGCAGCC GAGCGTGCAG
GACGTGGGCC ACGTGCTGTC GATGTACATC GGCCCCGACG AGGTGCTGGC CGTGGTCGAC
CTCAATTTCA GGGAGGGCAC GGCGACCGGA GAGGCCGCCG ATGCCATCGC CGCGATCGAG
CAGCAGGTGC GCGGGCGCTT CCCGATGATC CGGCGGCTCT TCATCGAGGC GAGCGAGGCG
CCCGTGGATG AAGACGCGGC TTCCGCGCGG ACCGGCGGGA TCGTCGGCGT TGGCTGA
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| Protein sequence | MAAESKLAIY GAIAANVAIA ATKFTVAGIT GSSAMLSEGI HSAVDTFNGV LLLVGIRLSQ
RPATAEHPFG HGKELYFWSL IVAVLIFGLG GGVSFYEGIQ HIRKPEPMRD PGWNYVVLGL
AALFEGASFL VALRQFRVQS RGAPFWRALG QSKDPTTYTV LAEDSAALAG LAVAALGIYF
SHRLGMPALD GAASVVIGLL LAGVAVLLIS QARGLLIGEG IRPETARAIR ALAMEQPSVQ
DVGHVLSMYI GPDEVLAVVD LNFREGTATG EAADAIAAIE QQVRGRFPMI RRLFIEASEA
PVDEDAASAR TGGIVGVG
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