| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1649 |
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| Symbol | |
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| ID | 7974717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1782326 |
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| End bp | 1783651 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792248 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002943565 |
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| Protein GI | 239814655 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.756737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCTC CGCTGCAACA CATCCAGACT TCGCCCACGC TGCCGGCCTC GGCCGATGTC
GTCGTGATCG GCGGCGGCAT CATCGGCGTC TTCAGCGCCT ACTACCTGGC CCAGCGCGGC
CTGTCGGTCG CCCTGGTGGA GAAGGGCCGG ATCGGCGCCG AGCAGTCGAG CCGCAACTGG
GGCTGGTGCC GGCAGCAGAA CCGCGATGCC CGCGAACTGC CGCTGGCAAC CAAGAGCCTC
GAGCTCTGGG AACGCTTTGC CGCCGAGAGC GGCGAAGACA CCGGCTTTCA TCGCTGCGGG
CTGCTGTACC TCAGCAACGA CGAGGCCGAG ATTTCGCGCT GGGCCAGCTG GCGCGATTTT
GCGACGACCG CCGGCGTGAC GACCCACATC CTGAGCGCCC GCGAGGCCGC CGAGCGCGGC
CATGCGACCG GCCGAGCCTG GAAAGGCGGC GTCTTCTCGC CCAGCGATGG CACTGCCGAC
CCCGGCAAGG CCGCGCCGGC CGTGGCCGCT GCGCTCATCA AGCTCGGCGG CAGCGTCCAC
CAGAACTGCG CGGCGCGCGG CATCGAGACG GAAGGCGGAC GGGTCAGCGG CGTGATCACG
GAAGCCGGGG TCATCAAGAC CAGGACGGTC GTGATGGCGG GCGGCGCCTG GGCGTCTTCG
TTCTGCCGGC AACTGGGCAT CCGCTTTCCG CAGGCCTCGA TCCGCCAATC GATCCTGAGC
GTGTCCCCTG TGGAGCAGCG CCTGCCGGAT GCCGTGGTGA GCGCGGGCGT GTCCGCCACG
CGCCGCAACG ACGGACGCTA TGCACTGGCC ATCAGCGGCC GCGCTCGCGT GGACCCGACC
GGGCAGTTCA TGCGCTTCGC ACCGCAATTC GTGCCCATGT TCGCCAAGCG CTGGCGCAAC
CTTCGCCCGG GCGGCCTGGA AGCCATTCGA AGCGGCCATG AAACGCTCGC GCGCTGGCGG
CTCGATGCGC CAACGCCGAT GGAGCGCGTG CGCATCCTCG ATCCGAAGCC CGATCTGCCC
ACGGTCAGGG AGACCCACCG CCGCGCCATC GAACTGCTGC CCCAGCTTCG CGAGGCCAAG
ATCACGCATG CCTGGGCTGG CTACATCGAC AGCACGCCGG ACGGTGTTCC CGGCATCGGC
GAGGTGCCCG GCATGCCGGG GTTCATCCTG GCCGCGGGCT TTTCCGGACA CGGCTTCGGC
ATCGGCCCCG GCGCCGGCCA CCTGATCGCC GACCTTGCCA GCGGCGCCGA ACCGATCGTG
GATCCCGCGC CGTACAGGCC GGGACGGTTC AGCGGCTCGG CATGGGGCAA GGTCGCTGAT
TTCTAG
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| Protein sequence | MSPPLQHIQT SPTLPASADV VVIGGGIIGV FSAYYLAQRG LSVALVEKGR IGAEQSSRNW
GWCRQQNRDA RELPLATKSL ELWERFAAES GEDTGFHRCG LLYLSNDEAE ISRWASWRDF
ATTAGVTTHI LSAREAAERG HATGRAWKGG VFSPSDGTAD PGKAAPAVAA ALIKLGGSVH
QNCAARGIET EGGRVSGVIT EAGVIKTRTV VMAGGAWASS FCRQLGIRFP QASIRQSILS
VSPVEQRLPD AVVSAGVSAT RRNDGRYALA ISGRARVDPT GQFMRFAPQF VPMFAKRWRN
LRPGGLEAIR SGHETLARWR LDAPTPMERV RILDPKPDLP TVRETHRRAI ELLPQLREAK
ITHAWAGYID STPDGVPGIG EVPGMPGFIL AAGFSGHGFG IGPGAGHLIA DLASGAEPIV
DPAPYRPGRF SGSAWGKVAD F
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