| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1644 |
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| Symbol | |
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| ID | 7974712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1778203 |
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| End bp | 1779369 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792244 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002943561 |
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| Protein GI | 239814651 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.348632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGATCG TCGAAATCCG CGAGAAGACC ATCCCCATCA GCTCGCCCAT TCGCAACGCC
TACATCGACT TTAGCAAGAT GACCCTGAGC CTTGTCGCGG TGGTCACCGA CGTGATCCGC
GATGGCAAGC CCGTCGTTGG CTACGGCTTC AACTCGAACG GCCGCTACGG CCAGGGCAAG
CTGATGCGCG AGCGATTCAT TCCGCGCATC ATGGAGGCGA AGCCGTCGTC CCTCGTCGAC
GACAGCGGCG ACAACCTCGA CCCGCACAAG ATCTGGAACA CGATGTTCAC CAATGAGAAG
CCGGGCGGCC ATGGCGAGCG CTCGGTGGCC ATTGGCACCA TCGACATGGC GGTGTGGGAC
GCGGTGGCCA AGATCGAGGG CAAGCCGCTG TTCCAGTTGC TGGCCGACCG CTATGGCGAC
GGCAAGCCCA ACCGCAAGAT CTTCGTCTAC GCGGCGGGCG GCTACTACTA CCCGGGGCAG
GACCATGGGA AGCTCCAGGA CGAGATGCGC AGCTACATCG ACCGTGGCTA CACGGTCGTC
AAGAAGAAGA TCGGCGGCGC CTCGCTCGAC GAAGACCTGC GCCGCATCGA CTCGATCATG
GAAGTGCTGC AGGACGGCCA GAAGCTCTGC GTCGACGCCA ACGGGCGCTT CGACCTGGAA
ACCGCGATTG CCTATGCCAA GGCCCTGTCG CAGTACGACC TCTTCTGGTA CGAGGAGCCG
GGCGATCCGC TGGACTTCGA ATTGCAGGCA GCCTTGCGCA ATTTCTACAA GAACCCAATG
GCCACTGGCG AAGATCTCTT CTCGATGCAG GATGCGCGCA ACCTGATCCG CTACGGCGGC
ATGCGCCCGG ACCGCGATTG GCTGCAGTTC GACTGCGCGC TCAGCTACGG CCTGGTGGAG
TACCTGCGCA CGCTGGAGAT GTTGAAGGAA CATGGCTGGT CGGCCAGCCG CTGCATCCCG
CACGGCGGGC ACCAGATGTC GCTGAACATC GCTGCCGGCC TTGGCCTCGG GGGCAACGAG
TCGTACCCCG ACCTGTTCCA GCCATTCGGC GGGTTCCCGG ACGGCGTGAA GGTCGAGAAC
AGCTTCGTGA CCCTGCCCGA TCTGCCGGGG ATCGGCTTCG AGGGCAAGGC CGATCTGTAC
CGCGAGATGC AGGCGCTTTC GGCCTGA
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| Protein sequence | MKIVEIREKT IPISSPIRNA YIDFSKMTLS LVAVVTDVIR DGKPVVGYGF NSNGRYGQGK
LMRERFIPRI MEAKPSSLVD DSGDNLDPHK IWNTMFTNEK PGGHGERSVA IGTIDMAVWD
AVAKIEGKPL FQLLADRYGD GKPNRKIFVY AAGGYYYPGQ DHGKLQDEMR SYIDRGYTVV
KKKIGGASLD EDLRRIDSIM EVLQDGQKLC VDANGRFDLE TAIAYAKALS QYDLFWYEEP
GDPLDFELQA ALRNFYKNPM ATGEDLFSMQ DARNLIRYGG MRPDRDWLQF DCALSYGLVE
YLRTLEMLKE HGWSASRCIP HGGHQMSLNI AAGLGLGGNE SYPDLFQPFG GFPDGVKVEN
SFVTLPDLPG IGFEGKADLY REMQALSA
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