| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1643 |
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| Symbol | |
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| ID | 7974711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1777200 |
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| End bp | 1778099 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792243 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943560 |
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| Protein GI | 239814650 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.492229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGA TCTGGCTTGA TGACTTCCTC GCGTTGGCAG CAACGGGGAA CTTCTCGCGC
GCGGCAGATG AGCGCCACAG TTCCCAACCC GCATTCAGCC GTCGCATTCG CGCGCTGGAG
GAGTGGATCG GCGCCGACTT GTTCGACCGC AGCACGCAGC CCGCCACACT CACCGAAGTT
GGCGAGTGGT TTGCCGGCGT GGCGCAGGAG TTGGCCGCGA GGGTGGCGCG CGTGCCCGGT
GACGCGAGGA GGGTTGCGGA GGCCAGTTCG GTCACCCTGC GCATTGCGTG CACGCATGCG
CTTTCCATGA CTTTCCTGCC GCGATGGATA CGTAGCCTCG AGTCGAGCAT CACGCTCGGG
CCGGTGCAGC TCATGTCCGA CGTCCTCCAG CGTTGCGAAT CCCTGATGCT GCAGAGCAAG
GTTCAGTTTG TACTGAGCCA CGCGCATCCC GACGCCCACG GCGCGCTCGA TGCTGACCCC
TACAGATCAG CCAGGATCGG CGAAGACATG CTGATCGCAG TGTCCGCGCC CAATGGCTCC
GGCAAGCCGC TGCATCAGCT TTCACGCAAA GGCGCATCCG CCGTACCGTT GCTCTTGTAC
AGCGAGGAAT CCGGGCTGGG ACGCATCATG CGTGCCGTCG TGAGCCGACG GCTGGAGTCG
CAAGCAGTAC AGCCCGTCTT CACGGCCCAT CTCGCCTCCG TCCTCCGGAC GATGGCACTG
GACAGCAGGG GCATCGCATG GCTGCCGCGG ACCCTCGTGG AGGAAGACAC CGGCCAAGGG
CGCCTTGTCG CCGCAGCGAG CAGCGAGTGG GCCGTTCCGC TGGAAATCAG GCTCTACCGA
GACAGCGAGC TCTTGGGGAA GGCGGCGAAT GAATTCTGGA GTGCTGCGAT CAGGAAGTGA
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| Protein sequence | MNLIWLDDFL ALAATGNFSR AADERHSSQP AFSRRIRALE EWIGADLFDR STQPATLTEV
GEWFAGVAQE LAARVARVPG DARRVAEASS VTLRIACTHA LSMTFLPRWI RSLESSITLG
PVQLMSDVLQ RCESLMLQSK VQFVLSHAHP DAHGALDADP YRSARIGEDM LIAVSAPNGS
GKPLHQLSRK GASAVPLLLY SEESGLGRIM RAVVSRRLES QAVQPVFTAH LASVLRTMAL
DSRGIAWLPR TLVEEDTGQG RLVAAASSEW AVPLEIRLYR DSELLGKAAN EFWSAAIRK
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